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HC-Pro_protein
Euk-VirSaffron_latent_virus
HC-Pro_protein__YP_009458610__Saffron_latent_virus__2070152
Identity
- Accession:
- YP_009458610 ↗
- Protein ID:
- HC-Pro_protein
- Kingdom:
- euk
Quality
85.0
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Saffron_latent_virus
TaxID: 2070152
Cluster
View cluster (80 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-106
Domain cluster:
rep: HC-Pro__YP_009252411__Tobacco_mosqueado_virus__1792583__D31-64_66-104
D2
high
residues 112-176
Domain cluster:
rep: HC-Pro_protein__YP_006405405__Basella_rugose_mosaic_virus__373398__D110-165
D3
medium
residues 177-237_311-340
Domain cluster:
rep: HC-Pro__YP_001936179__Verbena_virus_Y__515446__D186-209_223-267_313-337
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00851.25 best | Peptidase_C6 | 41.2 | 1.50e-10 | 71.4% | 13.0% |
D4
medium
residues 238-310_341-457
Domain cluster:
rep: HC-Pro_protein__YP_006590094__Chinese_yam_necrotic_mosaic_virus__128818__D95-261
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00851.25 best | Peptidase_C6 | 183.4 | 1.00e-53 | 63.7% | 27.1% |
| PF00851.25 | Peptidase_C6 | 42.8 | 5.00e-11 | 38.4% | 17.3% |