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HC-Pro_protein
Euk-VirDaphne_mosaic_virus
HC-Pro_protein__YP_611112__Daphne_mosaic_virus__578107
Identity
- Accession:
- YP_611112 ↗
- Protein ID:
- HC-Pro_protein
- Kingdom:
- euk
Quality
84.2
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Daphne_mosaic_virus
TaxID: 578107
Cluster
View cluster (80 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 269-457
Domain cluster:
rep: HC-Pro_protein__YP_006590094__Chinese_yam_necrotic_mosaic_virus__128818__D95-261
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00851.25 best | Peptidase_C6 | 248.2 | 2.30e-73 | 99.5% | 41.6% |
D2
medium
residues 33-108
Domain cluster:
rep: HC-Pro__YP_009252411__Tobacco_mosqueado_virus__1792583__D31-64_66-104
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00851.25 best | Peptidase_C6 | 31.5 | 1.40e-07 | 97.4% | 15.4% |
D3
medium
residues 114-176
Domain cluster:
rep: HC-Pro_protein__YP_006405405__Basella_rugose_mosaic_virus__373398__D110-165
D4
medium
residues 211-268
Domain cluster:
rep: helper_component_protein__YP_006280732__Tomato_necrotic_stunt_virus__1176153__D223-273
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00851.25 best | Peptidase_C6 | 30.7 | 2.40e-07 | 98.3% | 11.8% |