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CCD22115.1
Arc-VirHE580238__CCD22115.1__X__00027
Identity
- Accession:
- HE580238 ↗
- Protein ID:
- CCD22115.1 ↗
- Kingdom:
- archaea
Quality
67.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 54-158
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.81 | 62.0 | 6.43e-01 | 92.4% | 84.8% |
| 1lvoA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.79 | 57.0 | 6.14e-01 | 96.2% | 88.6% |
| 1boqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.74 | 62.0 | 6.24e-01 | 92.4% | 86.9% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.72 | 66.0 | 6.68e-01 | 100.0% | 99.0% |
| 1havB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 62.0 | 6.27e-01 | 92.4% | 98.1% |
| 1buiA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 62.0 | 5.84e-01 | 94.3% | 88.1% |
| 3szeA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.70 | 64.0 | 4.47e-01 | 98.1% | 42.9% |
| 1autC01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 61.0 | 5.61e-01 | 94.3% | 89.6% |
| 3dfjA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 61.0 | 5.59e-01 | 94.3% | 89.6% |
| 5brrE01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 61.0 | 5.57e-01 | 94.3% | 88.8% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 57.0 | 5.78e-01 | 100.0% | 90.5% |
| 1si5H01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 60.0 | 5.75e-01 | 95.2% | 89.1% |
| 2bhgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 57.0 | 5.79e-01 | 100.0% | 93.1% |
| 3f1sB03 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 61.0 | 5.89e-01 | 99.0% | 93.0% |
| 1arbA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 56.0 | 5.36e-01 | 94.3% | 80.3% |
| 3nxpA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 57.0 | 4.71e-01 | 94.3% | 66.5% |
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 29.0 | 4.07e-01 | 87.6% | 89.8% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.64 | 48.0 | 4.86e-01 | 95.2% | 80.4% |
| 1krhA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 39.0 | 4.11e-01 | 78.1% | 75.3% |
| 2kz4A00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.58 | 46.0 | 4.60e-01 | 87.6% | 94.6% |
| 1x31A02 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.58 | 43.0 | 2.90e-01 | 83.8% | 21.0% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 36.0 | 3.36e-01 | 73.3% | 49.6% |
| 1sg5A01 | 2.30.30.400 | Mainly Beta › Roll › SH3 type barrels. › Rof-like | 0.57 | 40.0 | 4.51e-01 | 97.1% | 100.0% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 29.0 | 3.59e-01 | 81.0% | 80.6% |
| 2budA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 37.0 | 3.98e-01 | 70.5% | 77.2% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 34.0 | 4.03e-01 | 70.5% | 93.9% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 33.0 | 3.92e-01 | 92.4% | 91.2% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.54 | 39.0 | 4.30e-01 | 81.0% | 100.0% |
| 4m78N00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 35.0 | 4.05e-01 | 71.4% | 97.2% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.53 | 39.0 | 3.88e-01 | 77.1% | 91.0% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.53 | 41.0 | 3.47e-01 | 81.9% | 73.1% |
| 1qftB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 36.0 | 3.11e-01 | 73.3% | 79.3% |
| 2imzA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.50 | 37.0 | 3.41e-01 | 79.0% | 89.4% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5019852 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.84 | 73.0 | 5.68e-01 | 100.0% | 46.2% |
| 4014819 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.81 | 70.0 | 5.26e-01 | 100.0% | 41.2% |
| 4614564 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.79 | 66.0 | 5.22e-01 | 100.0% | 46.7% |
| 3340540 | 1.1.17.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Nal1_C | 0.77 | 72.0 | 5.20e-01 | 100.0% | 44.0% |
| 3287150 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.77 | 72.0 | 5.57e-01 | 100.0% | 48.8% |
| 3199494 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.75 | 69.0 | 5.30e-01 | 99.0% | 48.6% |
| 2141907 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 67.0 | 5.29e-01 | 100.0% | 50.8% |
| 3234951 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.73 | 61.0 | 4.58e-01 | 100.0% | 37.6% |
| 3246847 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.72 | 56.0 | 4.54e-01 | 100.0% | 44.6% |
| 3576746 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.70 | 65.0 | 5.32e-01 | 100.0% | 64.9% |
| 3517452 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.70 | 64.0 | 5.48e-01 | 100.0% | 70.3% |
| 4557948 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.70 | 64.0 | 4.69e-01 | 99.0% | 43.8% |
| 3906468 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.69 | 65.0 | 4.68e-01 | 100.0% | 43.6% |
| 3507580 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.69 | 65.0 | 5.08e-01 | 100.0% | 78.0% |
| 3518677 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.69 | 64.0 | 4.62e-01 | 100.0% | 40.8% |
| 3501491 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.69 | 63.0 | 5.73e-01 | 98.1% | 80.7% |
| 3497558 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.69 | 64.0 | 4.71e-01 | 100.0% | 47.8% |
| 4274760 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.69 | 64.0 | 4.61e-01 | 100.0% | 42.9% |
| 3414189 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.68 | 63.0 | 4.57e-01 | 100.0% | 43.3% |
| 3913731 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.68 | 63.0 | 4.59e-01 | 100.0% | 46.9% |
| 3479686 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.68 | 63.0 | 4.53e-01 | 100.0% | 43.9% |
| 3902537 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.68 | 62.0 | 4.70e-01 | 100.0% | 48.2% |
| 3470154 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.68 | 63.0 | 4.92e-01 | 100.0% | 59.5% |
| 3839016 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.68 | 35.0 | 4.29e-01 | 96.2% | 80.0% |
| 3893666 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.67 | 62.0 | 4.61e-01 | 100.0% | 46.7% |
| 3863965 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.67 | 62.0 | 4.65e-01 | 100.0% | 51.2% |
| 3390983 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.67 | 62.0 | 4.57e-01 | 100.0% | 50.0% |
| 3515916 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.67 | 61.0 | 5.23e-01 | 100.0% | 71.5% |
| 3776853 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.65 | 60.0 | 4.41e-01 | 100.0% | 50.4% |
| 3500739 | 1.1.7.66 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Trypsin | 0.64 | 48.0 | 5.05e-01 | 77.1% | 85.3% |
| 3843200 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.64 | 59.0 | 4.38e-01 | 100.0% | 45.6% |
| 3409540 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.62 | 56.0 | 4.29e-01 | 100.0% | 48.2% |
| 3546733 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.62 | 57.0 | 4.29e-01 | 100.0% | 47.6% |
| 3219409 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 45.0 | 4.82e-01 | 92.4% | 87.8% |
| 3253267 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 38.0 | 4.21e-01 | 93.3% | 76.5% |
| 3404225 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.60 | 54.0 | 4.32e-01 | 99.0% | 51.9% |
| 3931055 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.60 | 37.0 | 4.31e-01 | 93.3% | 86.7% |
| 4013811 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.60 | 39.0 | 4.20e-01 | 97.1% | 77.8% |
| 4331397 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.59 | 36.0 | 4.04e-01 | 74.3% | 80.0% |
| 4997059 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.59 | 36.0 | 4.09e-01 | 96.2% | 84.0% |
| 4015757 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 40.0 | 3.19e-01 | 70.5% | 42.4% |
| 3967986 | 4.7.1.2 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF | 0.58 | 41.0 | 4.57e-01 | 73.3% | 100.0% |
| 4215822 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.58 | 31.0 | 3.63e-01 | 91.4% | 75.7% |
| 5048974 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 39.0 | 3.91e-01 | 71.4% | 72.7% |
| 4500974 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.56 | 44.0 | 4.21e-01 | 95.2% | 73.3% |
| 4976092 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 38.0 | 4.10e-01 | 70.5% | 88.9% |
| 3416878 | 77.3.1.3 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN | 0.51 | 35.0 | 2.92e-01 | 92.4% | 40.5% |
D2
medium
residues 1-53