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CCD22135.1
Arc-VirHE580238__CCD22135.1__X__00047
Identity
- Accession:
- HE580238 ↗
- Protein ID:
- CCD22135.1 ↗
- Kingdom:
- archaea
Quality
91.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 34-88
Domain cluster:
representative
CATH (68)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6kjuB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.75 | 51.0 | 3.96e-01 | 70.9% | 38.5% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.75 | 51.0 | 5.42e-01 | 70.9% | 95.7% |
| 3bwlB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.74 | 50.0 | 3.87e-01 | 70.9% | 34.1% |
| 4hh3A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.71 | 48.0 | 3.82e-01 | 70.9% | 36.0% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 49.0 | 3.71e-01 | 72.7% | 64.9% |
| 2rovA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.69 | 59.0 | 4.72e-01 | 100.0% | 55.6% |
| 3fh1A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 45.0 | 3.56e-01 | 70.9% | 32.0% |
| 4bq2D01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.67 | 45.0 | 3.16e-01 | 70.9% | 84.7% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.67 | 49.0 | 3.66e-01 | 78.2% | 62.9% |
| 4qqsB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.66 | 52.0 | 3.26e-01 | 87.3% | 16.0% |
| 3n91A02 | 2.40.128.420 | Mainly Beta › Beta Barrel › Lipocalin › | 0.66 | 45.0 | 3.42e-01 | 70.9% | 29.4% |
| 1r0mA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.65 | 54.0 | 4.23e-01 | 98.2% | 96.9% |
| 1h7zA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.65 | 44.0 | 3.09e-01 | 70.9% | 25.1% |
| 5iu1B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.65 | 51.0 | 4.10e-01 | 87.3% | 45.5% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.64 | 57.0 | 3.49e-01 | 100.0% | 69.5% |
| 2g8sB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.63 | 56.0 | 3.39e-01 | 100.0% | 72.9% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 40.0 | 3.41e-01 | 80.0% | 40.7% |
| 5hmaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 43.0 | 3.56e-01 | 74.5% | 53.8% |
| 1mpxA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 49.0 | 3.23e-01 | 92.7% | 19.6% |
| 4fczA00 | 3.10.450.710 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC | 0.61 | 43.0 | 3.10e-01 | 78.2% | 25.1% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.60 | 45.0 | 3.32e-01 | 81.8% | 64.3% |
| 1e5tA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 47.0 | 2.87e-01 | 85.5% | 16.5% |
| 4hvtA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 46.0 | 2.90e-01 | 85.5% | 18.4% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.60 | 47.0 | 3.99e-01 | 94.5% | 84.9% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.60 | 51.0 | 3.53e-01 | 94.5% | 92.3% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 44.0 | 4.05e-01 | 92.7% | 59.0% |
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 40.0 | 3.60e-01 | 72.7% | 53.6% |
| 3azoA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 47.0 | 3.06e-01 | 90.9% | 21.6% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.58 | 49.0 | 4.50e-01 | 98.2% | 91.9% |
| 2opjA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 45.0 | 3.94e-01 | 87.3% | 87.2% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.58 | 41.0 | 2.82e-01 | 78.2% | 86.3% |
| 1xteA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 46.0 | 3.80e-01 | 96.4% | 77.6% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 39.0 | 3.31e-01 | 83.6% | 40.2% |
| 3dcxA00 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.57 | 46.0 | 3.80e-01 | 98.2% | 46.2% |
| 4a8jB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 39.0 | 2.64e-01 | 72.7% | 25.9% |
| 4gn2A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.57 | 42.0 | 2.84e-01 | 83.6% | 24.6% |
| 2lezA00 | 3.30.2450.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 | 0.57 | 42.0 | 3.31e-01 | 81.8% | 39.2% |
| 3gd6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 45.0 | 3.53e-01 | 96.4% | 44.4% |
| 2k50A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 46.0 | 3.85e-01 | 94.5% | 51.0% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.56 | 44.0 | 3.67e-01 | 92.7% | 76.6% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 42.0 | 4.24e-01 | 89.1% | 94.5% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 39.0 | 2.64e-01 | 78.2% | 18.7% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 39.0 | 3.65e-01 | 78.2% | 58.3% |
| 4qxaB00 | 2.30.29.230 | Mainly Beta › Roll › PH-domain like › | 0.55 | 46.0 | 3.53e-01 | 100.0% | 53.7% |
| 2vpjA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.55 | 43.0 | 2.82e-01 | 90.9% | 100.0% |
| 2k5vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 40.0 | 3.44e-01 | 90.9% | 44.9% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.55 | 44.0 | 3.29e-01 | 90.9% | 42.5% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 45.0 | 3.71e-01 | 98.2% | 82.5% |
| 3ebwA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 44.0 | 3.48e-01 | 100.0% | 82.4% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.55 | 41.0 | 3.17e-01 | 83.6% | 35.5% |
| 3gw6D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 44.0 | 3.35e-01 | 100.0% | 73.9% |
| 1lv9A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 41.0 | 3.95e-01 | 89.1% | 71.9% |
| 3vhxF00 | 2.60.40.4330 | Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain | 0.54 | 36.0 | 3.07e-01 | 70.9% | 80.4% |
| 2l2mA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 40.0 | 3.77e-01 | 83.6% | 84.3% |
| 4qrlA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 44.0 | 3.60e-01 | 94.5% | 79.1% |
| 3pg4A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.54 | 38.0 | 2.60e-01 | 78.2% | 87.8% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 36.0 | 2.96e-01 | 70.9% | 36.1% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 3.73e-01 | 90.9% | 71.4% |
| 2ia1A01 | 3.30.500.20 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › BH3703-like domains | 0.53 | 36.0 | 2.96e-01 | 74.5% | 78.2% |
| 2akjA03 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.52 | 42.0 | 3.32e-01 | 92.7% | 50.4% |
| 2wozA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.52 | 41.0 | 2.71e-01 | 96.4% | 87.0% |
| 6t5kC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 40.0 | 2.75e-01 | 87.3% | 23.7% |
| 3licA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 41.0 | 3.05e-01 | 96.4% | 53.9% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 40.0 | 3.89e-01 | 90.9% | 82.5% |
| 4eo3A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 39.0 | 3.11e-01 | 90.9% | 79.7% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 37.0 | 3.51e-01 | 100.0% | 62.5% |
| 5n1tA03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.51 | 41.0 | 3.87e-01 | 98.2% | 83.1% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.50 | 37.0 | 3.07e-01 | 89.1% | 50.4% |
ECOD (76)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3389626 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.76 | 59.0 | 5.28e-01 | 83.6% | 61.3% |
| 3260099 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 53.0 | 4.46e-01 | 96.4% | 47.8% |
| 5019127 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.72 | 48.0 | 2.89e-01 | 70.9% | 11.9% |
| 3999510 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.72 | 52.0 | 3.86e-01 | 78.2% | 30.7% |
| 3596066 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.71 | 61.0 | 4.69e-01 | 96.4% | 44.0% |
| 5018331 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.71 | 48.0 | 3.09e-01 | 70.9% | 16.9% |
| 3913149 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.70 | 50.0 | 3.63e-01 | 74.5% | 32.7% |
| 3802472 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.70 | 61.0 | 3.77e-01 | 98.2% | 39.0% |
| 4015435 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.70 | 57.0 | 4.76e-01 | 90.9% | 52.6% |
| 3638210 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.69 | 52.0 | 3.55e-01 | 83.6% | 42.0% |
| 3818311 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.68 | 47.0 | 3.43e-01 | 72.7% | 30.6% |
| 4599318 | 2.1.1.299 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S12 | 0.68 | 52.0 | 4.65e-01 | 90.9% | 57.5% |
| 5077400 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.68 | 58.0 | 4.80e-01 | 100.0% | 55.8% |
| 3659202 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.67 | 47.0 | 4.18e-01 | 80.0% | 50.0% |
| 3404941 | 220.1.1.15 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › BBL5 | 0.67 | 54.0 | 3.96e-01 | 96.4% | 39.4% |
| 3648413 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.67 | 45.0 | 3.87e-01 | 83.6% | 43.3% |
| 3577911 | 220.1.1.15 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › BBL5 | 0.67 | 56.0 | 4.21e-01 | 98.2% | 43.4% |
| 3289254 | 220.1.1.82 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 | 0.67 | 54.0 | 4.63e-01 | 94.5% | 64.2% |
| 4173753 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.67 | 55.0 | 3.76e-01 | 98.2% | 77.3% |
| 4998373 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 43.0 | 4.49e-01 | 72.7% | 78.0% |
| 4929019 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.64 | 48.0 | 4.01e-01 | 90.9% | 47.4% |
| 5844 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.64 | 53.0 | 4.25e-01 | 98.2% | 54.7% |
| 3473974 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.63 | 50.0 | 3.74e-01 | 90.9% | 49.0% |
| 1954221 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.62 | 50.0 | 4.56e-01 | 92.7% | 72.0% |
| 3535752 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 50.0 | 3.80e-01 | 94.5% | 52.9% |
| 5013239 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.61 | 46.0 | 3.85e-01 | 89.1% | 47.3% |
| 1678532 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.60 | 41.0 | 3.90e-01 | 72.7% | 60.0% |
| 4928464 | 296.1.1.1 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › NIR_SIR | 0.60 | 46.0 | 3.59e-01 | 85.5% | 40.7% |
| 3706903 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 46.0 | 3.48e-01 | 89.1% | 58.2% |
| 3584285 | 5.1.11.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DPPIV_N | 0.60 | 48.0 | 2.90e-01 | 89.1% | 25.0% |
| 3676745 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.60 | 49.0 | 3.83e-01 | 100.0% | 70.7% |
| None | — | 0.59 | 49.0 | 3.53e-01 | 100.0% | 47.4% | |
| 4343392 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 48.0 | 3.94e-01 | 94.5% | 68.2% |
| 5080919 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 48.0 | 4.01e-01 | 96.4% | 49.5% |
| 3788782 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.59 | 50.0 | 2.95e-01 | 100.0% | 74.8% |
| 3212945 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.59 | 49.0 | 4.86e-01 | 94.5% | 91.5% |
| None | — | 0.59 | 48.0 | 2.69e-01 | 89.1% | 14.2% | |
| 3622886 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.59 | 48.0 | 2.67e-01 | 89.1% | 13.5% |
| 3924083 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.59 | 48.0 | 3.59e-01 | 100.0% | 57.1% |
| 4995163 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.59 | 49.0 | 3.33e-01 | 100.0% | 73.8% |
| 3996007 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.59 | 46.0 | 2.76e-01 | 89.1% | 24.0% |
| 4990926 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.58 | 39.0 | 4.10e-01 | 70.9% | 94.0% |
| 3508989 | 2484.1.1.230 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 | 0.58 | 51.0 | 3.73e-01 | 100.0% | 63.2% |
| 5058918 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 49.0 | 3.98e-01 | 100.0% | 76.5% |
| 5030959 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.58 | 49.0 | 4.45e-01 | 100.0% | 73.8% |
| 3593291 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 43.0 | 3.27e-01 | 83.6% | 33.8% |
| 3993689 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.57 | 40.0 | 3.69e-01 | 74.5% | 56.0% |
| 5036294 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 45.0 | 3.84e-01 | 90.9% | 52.0% |
| 4002646 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 43.0 | 2.77e-01 | 81.8% | 39.2% |
| 3507177 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.57 | 46.0 | 2.86e-01 | 100.0% | 85.7% |
| 4968450 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 38.0 | 3.89e-01 | 72.7% | 70.9% |
| 3653490 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.57 | 51.0 | 3.21e-01 | 100.0% | 86.6% |
| 4964487 | 218.1.1.12 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › PF26684 | 0.57 | 46.0 | 3.76e-01 | 92.7% | 49.1% |
| 3596829 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 41.0 | 3.28e-01 | 83.6% | 37.4% |
| 5032200 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.56 | 45.0 | 3.75e-01 | 92.7% | 48.6% |
| 3813686 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 39.0 | 2.61e-01 | 76.4% | 92.5% |
| 3864913 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.56 | 44.0 | 3.28e-01 | 90.9% | 52.9% |
| 5062351 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 45.0 | 3.72e-01 | 98.2% | 47.8% |
| 5050697 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.55 | 37.0 | 3.86e-01 | 70.9% | 86.0% |
| 3320817 | 2004.1.1.174 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Elong_Iki1 | 0.55 | 37.0 | 2.43e-01 | 76.4% | 13.4% |
| 3251342 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.55 | 43.0 | 3.59e-01 | 96.4% | 77.5% |
| 4930094 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.55 | 47.0 | 3.85e-01 | 98.2% | 81.0% |
| 4967296 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.55 | 42.0 | 3.62e-01 | 92.7% | 50.0% |
| 3788120 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 46.0 | 2.90e-01 | 100.0% | 86.5% |
| 4946160 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.54 | 36.0 | 3.59e-01 | 70.9% | 73.3% |
| 4975879 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 43.0 | 3.64e-01 | 100.0% | 86.4% |
| 5004108 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 45.0 | 3.74e-01 | 96.4% | 53.0% |
| 3783089 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 40.0 | 3.30e-01 | 90.9% | 56.7% |
| 3516513 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.53 | 43.0 | 2.45e-01 | 100.0% | 34.6% |
| 3614175 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 46.0 | 3.67e-01 | 98.2% | 75.5% |
| 5020459 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 44.0 | 3.65e-01 | 96.4% | 53.5% |
| 3442564 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.52 | 36.0 | 3.65e-01 | 85.5% | 78.2% |
| 5061538 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 34.0 | 3.49e-01 | 70.9% | 81.8% |
| 4948342 | 10.28.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 | 0.51 | 37.0 | 2.68e-01 | 80.0% | 38.3% |
| 3948020 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.51 | 33.0 | 2.75e-01 | 70.9% | 33.6% |
| 3259407 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 38.0 | 3.35e-01 | 83.6% | 69.4% |
D2
medium
residues 89-142
Domain cluster:
representative