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CCD22137.1
Arc-VirHE580238__CCD22137.1__X__00049
Identity
- Accession:
- HE580238 ↗
- Protein ID:
- CCD22137.1 ↗
- Kingdom:
- archaea
Quality
91.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-92
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yg2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 59.0 | 5.81e-01 | 86.3% | 73.4% |
| 2o0yB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 45.0 | 4.81e-01 | 71.2% | 64.6% |
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 48.0 | 4.76e-01 | 75.3% | 61.8% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 53.0 | 4.82e-01 | 86.3% | 56.8% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 50.0 | 4.03e-01 | 86.3% | 37.7% |
| 3qyfA03 | 1.10.10.1690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Uncharacterised CRISPR-associated protein family, UPF0236 | 0.73 | 44.0 | 4.73e-01 | 90.4% | 72.1% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 47.0 | 4.80e-01 | 86.3% | 67.1% |
| 3b73B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 48.0 | 4.50e-01 | 76.7% | 58.4% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 47.0 | 4.75e-01 | 78.1% | 70.8% |
| 4tv7D01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 44.0 | 4.22e-01 | 75.3% | 56.5% |
| 3oopA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 50.0 | 4.08e-01 | 87.7% | 42.5% |
| 5hvqC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 52.0 | 4.73e-01 | 90.4% | 62.2% |
| 2v7fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 52.0 | 4.14e-01 | 82.2% | 44.6% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 51.0 | 4.86e-01 | 82.2% | 73.8% |
| 2qenA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 47.0 | 4.79e-01 | 83.6% | 78.6% |
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 45.0 | 3.97e-01 | 78.1% | 47.7% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 45.0 | 3.71e-01 | 80.8% | 40.3% |
| 1stzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 48.0 | 4.63e-01 | 84.9% | 68.2% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 46.0 | 4.49e-01 | 86.3% | 70.0% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 43.0 | 3.48e-01 | 86.3% | 37.1% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 52.0 | 3.99e-01 | 98.6% | 61.9% |
| 1xdsB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 3.92e-01 | 82.2% | 59.8% |
| 2bbrA02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.58 | 41.0 | 3.71e-01 | 72.6% | 95.0% |
| 3cdhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 52.0 | 4.24e-01 | 100.0% | 58.2% |
| 4x0qA04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.58 | 46.0 | 3.81e-01 | 91.8% | 95.8% |
| 3py8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.57 | 49.0 | 3.97e-01 | 97.3% | 67.4% |
| 4yifF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 52.0 | 4.26e-01 | 100.0% | 65.4% |
| 2fxaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 51.0 | 3.99e-01 | 100.0% | 62.8% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 51.0 | 4.25e-01 | 100.0% | 64.5% |
| 1miwA04 | 1.10.246.80 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.55 | 39.0 | 4.13e-01 | 91.8% | 84.4% |
| 3cvrA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.53 | 41.0 | 2.90e-01 | 84.9% | 39.3% |
| 8be0A01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.52 | 42.0 | 3.15e-01 | 90.4% | 94.8% |
| 3zqcA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.51 | 33.0 | 3.46e-01 | 74.0% | 75.0% |
| 3hwcA01 | 1.10.3140.10 | Mainly Alpha › Orthogonal Bundle › 4-hydroxybutyryl-coa dehydratase, domain 1 › 4-hydroxybutyryl-coa dehydratase, domain 1 | 0.50 | 40.0 | 3.33e-01 | 93.2% | 72.1% |
| 3i3gA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 44.0 | 3.57e-01 | 100.0% | 56.6% |
| 1guxB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.50 | 44.0 | 3.58e-01 | 100.0% | 56.0% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.78 | 48.0 | 2.83e-01 | 78.1% | 9.0% | |
| 4937874 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.78 | 47.0 | 4.97e-01 | 72.6% | 67.7% |
| 5049281 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 66.0 | 5.93e-01 | 91.8% | 78.0% |
| 4056923 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.77 | 45.0 | 4.59e-01 | 71.2% | 60.0% |
| 5049987 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 56.0 | 4.99e-01 | 79.5% | 54.3% |
| 3262478 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 48.0 | 4.97e-01 | 71.2% | 67.1% |
| 2140756 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.76 | 50.0 | 4.40e-01 | 79.5% | 47.1% |
| 5027549 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.75 | 45.0 | 4.38e-01 | 71.2% | 55.0% |
| 4929718 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 53.0 | 4.66e-01 | 87.7% | 51.4% |
| 4195219 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.74 | 64.0 | 5.75e-01 | 94.5% | 80.0% |
| 4365970 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.74 | 68.0 | 5.84e-01 | 100.0% | 76.4% |
| 4586962 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.74 | 66.0 | 5.54e-01 | 97.3% | 69.2% |
| 4941477 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 57.0 | 5.11e-01 | 86.3% | 60.0% |
| 2326885 | 101.1.2.543 ↗ | alpha arrays › HTH › HTH › winged helix domain › AprA_N | 0.74 | 48.0 | 4.47e-01 | 82.2% | 52.7% |
| 3372110 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.74 | 49.0 | 5.05e-01 | 72.6% | 71.4% |
| 4961970 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 44.0 | 4.44e-01 | 72.6% | 59.5% |
| 3974773 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 65.0 | 5.75e-01 | 97.3% | 79.0% |
| 4974022 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.73 | 53.0 | 5.05e-01 | 82.2% | 65.9% |
| 3169050 | 101.1.2.94 ↗ | alpha arrays › HTH › HTH › winged helix domain › ANAPC2 | 0.72 | 49.0 | 4.53e-01 | 71.2% | 58.1% |
| 4976799 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 51.0 | 4.64e-01 | 87.7% | 56.8% |
| 4972751 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.71 | 50.0 | 4.43e-01 | 86.3% | 51.4% |
| 2390055 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.71 | 45.0 | 4.42e-01 | 75.3% | 59.5% |
| 4944400 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 44.0 | 4.54e-01 | 87.7% | 65.7% |
| 4929381 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 45.0 | 4.50e-01 | 76.7% | 62.7% |
| 4975263 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.70 | 52.0 | 4.93e-01 | 87.7% | 67.1% |
| 3462112 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.70 | 48.0 | 4.60e-01 | 71.2% | 63.5% |
| 4667119 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 49.0 | 4.04e-01 | 87.7% | 40.0% |
| 4665743 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 52.0 | 4.62e-01 | 82.2% | 55.2% |
| 5030872 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 50.0 | 4.11e-01 | 87.7% | 42.3% |
| 3280479 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.69 | 52.0 | 4.84e-01 | 91.8% | 64.4% |
| 3729923 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.69 | 57.0 | 4.41e-01 | 90.4% | 48.1% |
| 3228605 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.69 | 60.0 | 4.54e-01 | 100.0% | 85.4% |
| 5021067 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 58.0 | 5.14e-01 | 91.8% | 66.7% |
| 5047660 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 43.0 | 4.31e-01 | 87.7% | 61.3% |
| None | — | 0.68 | 43.0 | 3.73e-01 | 72.6% | 41.8% | |
| 4167856 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.68 | 52.0 | 4.96e-01 | 90.4% | 70.6% |
| 4940863 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 44.0 | 4.25e-01 | 75.3% | 59.0% |
| 3550852 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.67 | 52.0 | 4.69e-01 | 90.4% | 61.0% |
| 4928633 | 101.1.2.18 ↗ | alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S19e | 0.66 | 50.0 | 4.43e-01 | 80.8% | 61.9% |
| 4965164 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.66 | 51.0 | 4.68e-01 | 83.6% | 72.6% |
| 5062173 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 50.0 | 4.32e-01 | 100.0% | 52.2% |
| 4028109 | 3525.1.1.0 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain | 0.66 | 43.0 | 4.54e-01 | 89.0% | 75.4% |
| 4945461 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 53.0 | 4.86e-01 | 100.0% | 68.4% |
| 1511065 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.65 | 45.0 | 4.00e-01 | 78.1% | 49.1% |
| 4947701 | 101.1.2.882 ↗ | alpha arrays › HTH › HTH › winged helix domain › FeoA | 0.65 | 48.0 | 4.35e-01 | 91.8% | 58.0% |
| 5074949 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 57.0 | 5.29e-01 | 97.3% | 80.0% |
| 4016908 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 54.0 | 4.37e-01 | 100.0% | 50.7% |
| 5079289 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 43.0 | 3.88e-01 | 84.9% | 50.5% |
| 4927049 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.62 | 53.0 | 4.82e-01 | 97.3% | 70.0% |
| 4970543 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 44.0 | 4.37e-01 | 75.3% | 74.7% |
| 3786028 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.61 | 45.0 | 3.70e-01 | 89.0% | 40.7% |
| 4933929 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 43.0 | 4.30e-01 | 82.2% | 72.0% |
| 3190723 | 109.4.1.1506 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4, Importin_rep_6, TPR_IMB1, TPR_IPO5 | 0.61 | 43.0 | 2.40e-01 | 74.0% | 11.9% |
| 4486101 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 50.0 | 4.16e-01 | 91.8% | 57.6% |
| 4022146 | 101.1.2.520 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7779 | 0.59 | 47.0 | 4.23e-01 | 87.7% | 64.0% |
| 3602760 | 2003.1.5.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 | 0.58 | 43.0 | 2.79e-01 | 79.5% | 40.6% |
| 5042174 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.58 | 49.0 | 4.00e-01 | 93.2% | 77.8% |
| 4011979 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 51.0 | 4.30e-01 | 100.0% | 59.2% |
| 3173901 | 109.4.1.509 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRP12_HEAT | 0.58 | 40.0 | 2.39e-01 | 72.6% | 15.9% |
| 5011992 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 41.0 | 3.37e-01 | 80.8% | 43.0% |
| 3334874 | 2004.1.1.195 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C | 0.53 | 44.0 | 2.85e-01 | 94.5% | 93.7% |
| 3598955 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.52 | 39.0 | 3.42e-01 | 79.5% | 81.0% |
| 3994150 | 3525.1.1.2 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › AHD | 0.52 | 36.0 | 3.57e-01 | 84.9% | 69.3% |