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HE815464.1__CCH63488.1__X__00026
Bact-VirHE815464.1__CCH63488.1__X__00026
Identity
- Accession:
- HE815464 ↗
- Kingdom:
- phage
Quality
86.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Connertonviridae›
Firehammervirus›
Campylobacter_phage_CP21
TaxID: 2881391
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-65
Domain cluster:
rep: HE815464.1__CCH63486.1__X__00024__D23-80
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04055.28 best | Radical_SAM | 34.6 | 3.10e-08 | 95.3% | 39.2% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5v1qB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.80 | 72.0 | 4.63e-01 | 100.0% | 23.1% |
| 2yx0A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 62.0 | 3.95e-01 | 100.0% | 28.4% |
| 4jc0A02 | 3.30.750.210 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.69 | 59.0 | 5.06e-01 | 100.0% | 66.7% |
| 3p6lA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.62 | 42.0 | 2.82e-01 | 100.0% | 17.2% |
| 4i6kA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 49.0 | 3.31e-01 | 100.0% | 23.6% |
| 2f6kA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 46.0 | 3.02e-01 | 100.0% | 27.1% |
| 3r8eA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 46.0 | 3.62e-01 | 100.0% | 68.6% |
| 4bg8A01 | 3.30.420.430 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.51 | 43.0 | 3.54e-01 | 100.0% | 64.3% |
| 2yn0A00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.50 | 40.0 | 2.89e-01 | 100.0% | 30.6% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5062604 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.86 | 78.0 | 5.67e-01 | 100.0% | 40.6% |
| 5051987 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 77.0 | 4.79e-01 | 100.0% | 20.9% |
| 2870555 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 77.0 | 4.76e-01 | 100.0% | 20.2% |
| 2439603 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.84 | 76.0 | 5.08e-01 | 100.0% | 28.9% |
| 5051548 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.83 | 74.0 | 4.62e-01 | 100.0% | 19.7% |
| 5062088 | 2002.1.1.449 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF3641 | 0.83 | 75.0 | 4.72e-01 | 100.0% | 21.6% |
| 5036242 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.83 | 69.0 | 4.22e-01 | 100.0% | 16.3% |
| 5055869 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.82 | 74.0 | 4.48e-01 | 100.0% | 16.4% |
| 5049746 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.81 | 74.0 | 4.87e-01 | 100.0% | 26.9% |
| 5031546 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.81 | 73.0 | 4.65e-01 | 100.0% | 21.6% |
| 5055755 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.81 | 73.0 | 4.52e-01 | 100.0% | 18.8% |
| 4932624 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.81 | 73.0 | 4.83e-01 | 100.0% | 27.8% |
| 5054706 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.80 | 73.0 | 4.90e-01 | 100.0% | 29.6% |
| 5026080 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.80 | 72.0 | 4.58e-01 | 98.4% | 21.7% |
| 4941301 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.80 | 71.0 | 4.48e-01 | 100.0% | 20.8% |
| 5056316 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.79 | 70.0 | 4.37e-01 | 100.0% | 18.0% |
| 3972368 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.79 | 70.0 | 4.76e-01 | 100.0% | 29.8% |
| 4599886 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 70.0 | 4.79e-01 | 100.0% | 30.0% |
| 5022715 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 70.0 | 4.53e-01 | 100.0% | 23.9% |
| 5054293 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.77 | 69.0 | 4.37e-01 | 100.0% | 20.7% |
| 5057655 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.77 | 65.0 | 4.03e-01 | 100.0% | 16.9% |
| 4277885 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.76 | 67.0 | 4.65e-01 | 100.0% | 29.2% |
| 4970204 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.76 | 68.0 | 4.61e-01 | 100.0% | 29.1% |
| 5066795 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.76 | 69.0 | 4.65e-01 | 100.0% | 32.4% |
| 5079264 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.74 | 64.0 | 4.17e-01 | 100.0% | 23.1% |
| 4989132 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.73 | 64.0 | 3.99e-01 | 100.0% | 19.5% |
| 4238934 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.72 | 63.0 | 3.89e-01 | 100.0% | 20.1% |
| 3604607 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 61.0 | 4.12e-01 | 100.0% | 26.4% |
| 5005019 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 62.0 | 3.82e-01 | 100.0% | 16.6% |
| 141624 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.62 | 42.0 | 2.82e-01 | 100.0% | 17.2% |
| 3632222 | 7570.1.1.4 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › PF27239 | 0.59 | 50.0 | 3.76e-01 | 100.0% | 68.3% |
| 5073734 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.58 | 45.0 | 3.03e-01 | 100.0% | 21.1% |
| 4943112 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.56 | 45.0 | 3.00e-01 | 100.0% | 21.1% |
| 5080502 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.55 | 42.0 | 3.59e-01 | 100.0% | 51.4% |
| 4972653 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.54 | 45.0 | 3.38e-01 | 100.0% | 49.2% |