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HE815464.1__CCH63709.1__X__00247

Bact-Vir

HE815464.1__CCH63709.1__X__00247

Identity

Accession:
HE815464 ↗
Kingdom:
phage

Quality

81.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Connertonviridae› Firehammervirus› Campylobacter_phage_CP21

TaxID: 2881391

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 11-69
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4e2tB00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.92 86.0 5.96e-01 100.0% 38.5%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.86 78.0 5.51e-01 100.0% 38.0%
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.58 30.0 3.47e-01 71.2% 64.1%
6w1kA01 3.10.180.50 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 0.57 42.0 2.73e-01 79.7% 78.5%
5o7oC01 3.30.310.280 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.56 40.0 3.19e-01 100.0% 36.0%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 34.0 3.04e-01 84.7% 40.7%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 34.0 2.97e-01 98.3% 35.7%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 34.0 2.12e-01 81.4% 10.3%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.55 34.0 2.50e-01 98.3% 20.2%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.51 40.0 3.63e-01 91.5% 92.9%
7x4nE01 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.50 40.0 2.59e-01 91.5% 30.6%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4979631 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 82.0 5.87e-01 100.0% 39.3%
4971400 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 81.0 5.01e-01 100.0% 20.0%
4975578 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 79.0 4.93e-01 100.0% 21.5%
4992651 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 75.0 5.37e-01 100.0% 35.2%
4594307 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 78.0 5.46e-01 100.0% 34.7%
4970868 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 76.0 5.87e-01 100.0% 55.2%
4283619 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 76.0 5.85e-01 100.0% 47.2%
4983616 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 73.0 5.17e-01 100.0% 34.7%
3859918 375.1.1.202 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tmemb_55A 0.66 30.0 2.79e-01 89.8% 30.7%
4379431 376.1.6.12 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › Tmemb_55A 0.66 30.0 2.80e-01 89.8% 30.7%
3881240 3928.1.1.7 ↗ alpha bundles › Cell division protein CrgA › Cell division protein CrgA › Cell division protein CrgA › Tmemb_55A 0.66 30.0 2.87e-01 89.8% 32.9%
4992572 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.63 52.0 4.08e-01 98.3% 64.3%
3815764 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.61 45.0 3.68e-01 100.0% 40.0%
4339016 3523.1.1.1 ↗ beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG 0.59 45.0 3.83e-01 86.4% 80.0%
4880563 10.2.1.9 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Parvo_coat 0.55 37.0 2.71e-01 71.2% 67.6%
3235057 210.1.4.1 ↗ a+b four layers › Ntn/PP2C › Ntn › (Glycosyl)asparaginase › Asparaginase_2 0.55 42.0 2.73e-01 89.8% 97.5%
3593833 74.1.1.0 ↗ beta duplicates or obligate multimers › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain 0.54 36.0 3.85e-01 98.3% 85.7%
3702932 74.1.1.1 ↗ beta duplicates or obligate multimers › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › TFIIA_gamma_C 0.54 37.0 3.87e-01 98.3% 86.0%
3480669 227.1.1.11 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.53 41.0 3.14e-01 86.4% 88.1%
5050189 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 38.0 3.52e-01 100.0% 58.8%
3385723 3523.1.1.0 ↗ beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) 0.51 42.0 3.77e-01 100.0% 89.5%
3598052 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 39.0 3.54e-01 89.8% 60.0%
3665166 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 35.0 2.22e-01 83.1% 13.3%
3786067 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.50 39.0 3.61e-01 89.8% 70.0%
D2 medium residues 75-116
PDB
Domain cluster: rep: MF479730.1__ASU00677.1__X__00141__D128-168