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HE956708.2__CCI88450.1__BN79_022__00028
Bact-VirHE956708.2__CCI88450.1__BN79_022__00028
Identity
- Accession:
- HE956708 ↗
- Kingdom:
- phage
Quality
92.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Demerecviridae›
Epseptimavirus›
Yersinia_phage_phiR2-01
TaxID: 1206557
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-92
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7k7yG02 | 1.20.1120.10 | Mainly Alpha › Up-down Bundle › "Clostridium botulinum neurotoxin B, ""coiled-coil"" domain" › "Clostridium botulinum neurotoxin b, ""coiled-coil"" domain" | 0.81 | 61.0 | 3.97e-01 | 79.3% | 19.1% |
| 6ircA01 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.79 | 63.0 | 4.83e-01 | 84.8% | 41.9% |
| 3errA01 | 1.20.920.60 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.66 | 51.0 | 3.97e-01 | 83.7% | 76.4% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3579748 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.95 | 78.0 | 6.10e-01 | 87.0% | 45.9% |
| 3382019 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.91 | 74.0 | 6.24e-01 | 85.9% | 55.2% |
| 3183024 | 3755.3.1.46 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › She9_MDM33 | 0.81 | 65.0 | 5.50e-01 | 89.1% | 54.3% |
| 3925867 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.81 | 55.0 | 3.51e-01 | 72.8% | 16.4% |
| 3938243 | 3065.1.1.1 ↗ | alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › ANIS5_cation-bd | 0.78 | 57.0 | 4.10e-01 | 76.1% | 28.6% |
| 3913300 | 3755.3.1.303 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th | 0.75 | 61.0 | 5.15e-01 | 87.0% | 69.3% |
| 3937163 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.72 | 55.0 | 3.66e-01 | 82.6% | 20.5% |
| 3986220 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.72 | 52.0 | 4.81e-01 | 76.1% | 60.0% |
| 3222805 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.67 | 49.0 | 3.52e-01 | 77.2% | 26.3% |
| 4615849 | 7013.1.1.1 ↗ | alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 | 0.65 | 46.0 | 3.64e-01 | 72.8% | 54.6% |
| 3996198 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.59 | 42.0 | 3.59e-01 | 73.9% | 88.3% |
| 4663108 | 109.3.1.165 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4, Ank_5 | 0.50 | 41.0 | 2.88e-01 | 92.4% | 80.3% |