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HE962497.1__CCJ09701.1__BN19_048__00047

Bact-Vir

HE962497.1__CCJ09701.1__BN19_048__00047

Identity

Accession:
HE962497 ↗
Kingdom:
phage

Quality

75.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Saphexavirus› Streptococcus_phage_SP-QS1

TaxID: 1208587

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-92
PDB
Domain cluster: rep: OM735687.1__UNY50260.1__X__00039__D3-67
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.71 47.0 5.19e-01 89.2% 85.0%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 5.26e-01 90.5% 90.9%
1bywA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.65 45.0 4.03e-01 74.3% 90.0%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 39.0 4.41e-01 87.8% 90.4%
6v4xC01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 47.0 4.28e-01 91.9% 61.0%
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.61 43.0 3.95e-01 74.3% 88.5%
3wt0A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 43.0 3.40e-01 86.5% 35.6%
4c92F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 47.0 4.70e-01 100.0% 84.4%
4a2aA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.58 41.0 4.37e-01 85.1% 87.7%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 40.0 4.22e-01 89.2% 84.1%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.58 37.0 4.11e-01 87.8% 90.7%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 38.0 3.84e-01 98.6% 68.5%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 37.0 4.04e-01 90.5% 83.1%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 39.0 3.56e-01 100.0% 52.0%
1pnjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 47.0 4.52e-01 91.9% 91.9%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 39.0 4.27e-01 97.3% 94.6%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 38.0 4.07e-01 90.5% 78.5%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.56 38.0 4.12e-01 91.9% 91.2%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 41.0 2.94e-01 79.7% 45.4%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.55 37.0 4.13e-01 89.2% 98.1%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 44.0 4.41e-01 100.0% 88.2%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.55 33.0 3.83e-01 79.7% 93.5%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 37.0 3.72e-01 100.0% 71.2%
1mg7A01 3.30.70.1000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Switch protein XOL-1, GHMP-like 0.54 39.0 3.00e-01 75.7% 77.1%
1juvA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.54 42.0 3.12e-01 83.8% 43.5%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 40.0 4.16e-01 90.5% 88.2%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.54 36.0 4.03e-01 89.2% 100.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 40.0 3.99e-01 95.9% 77.2%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 35.0 3.97e-01 86.5% 98.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 36.0 3.97e-01 89.2% 98.1%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 34.0 3.90e-01 85.1% 100.0%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 34.0 3.89e-01 87.8% 100.0%
4bwxA03 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 41.0 4.04e-01 83.8% 88.7%
3hrzC01 2.20.210.20 Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › 0.53 33.0 3.86e-01 90.5% 95.9%
4xr7F02 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 42.0 3.94e-01 86.5% 93.3%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 43.0 4.29e-01 100.0% 89.6%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 39.0 3.96e-01 100.0% 82.7%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.51 44.0 3.37e-01 94.6% 48.5%
4c26A00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.51 31.0 3.25e-01 75.7% 65.2%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.51 43.0 4.19e-01 94.6% 95.3%
2c9oB02 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.51 38.0 3.42e-01 83.8% 74.3%
1u04A02 3.90.70.180 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.51 39.0 3.44e-01 83.8% 80.4%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 38.0 4.00e-01 89.2% 96.8%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 34.0 3.58e-01 86.5% 81.0%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 35.0 3.73e-01 86.5% 84.6%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 36.0 3.90e-01 86.5% 98.3%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 37.0 3.76e-01 89.2% 81.9%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5017559 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 69.0 7.37e-01 89.2% 98.5%
3959440 4.1.1.180 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3107 0.78 64.0 6.75e-01 91.9% 100.0%
4589595 4.1.1.447 ↗ beta barrels › SH3 › SH3 › SH3 › PF28065 0.77 50.0 5.30e-01 87.8% 75.4%
4231372 4.1.1.307 ↗ beta barrels › SH3 › SH3 › SH3 › PF26132 0.77 66.0 6.78e-01 97.3% 98.6%
4941512 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 47.0 4.89e-01 90.5% 67.1%
4010681 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.73 51.0 4.72e-01 93.2% 56.8%
4185009 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 50.0 5.33e-01 91.9% 81.5%
4660084 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 51.0 5.25e-01 100.0% 78.3%
4302032 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 50.0 5.31e-01 100.0% 81.5%
4124780 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 52.0 5.25e-01 95.9% 76.7%
5004476 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 50.0 5.28e-01 95.9% 83.1%
3987498 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.03e-01 100.0% 68.2%
4034320 4.1.1.398 ↗ beta barrels › SH3 › SH3 › SH3 › YolD 0.71 50.0 5.22e-01 90.5% 80.9%
4058174 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 48.0 5.10e-01 100.0% 80.0%
5077969 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 47.0 4.60e-01 87.8% 63.7%
4476045 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 50.0 5.12e-01 95.9% 78.6%
4574546 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 49.0 5.21e-01 91.9% 83.1%
5032461 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 51.0 5.43e-01 89.2% 87.7%
4212091 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 49.0 5.16e-01 94.6% 83.1%
4625654 4.1.1.445 ↗ beta barrels › SH3 › SH3 › SH3 › Spore_GerQ 0.70 51.0 5.11e-01 90.5% 76.0%
4079197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 47.0 4.54e-01 90.5% 62.4%
3281271 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.69 51.0 4.79e-01 93.2% 64.4%
3598125 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 51.0 5.15e-01 98.6% 78.7%
4139778 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 50.0 5.03e-01 95.9% 78.1%
3387119 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.68 47.0 4.46e-01 97.3% 60.0%
3286662 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.68 50.0 4.54e-01 97.3% 58.0%
3978997 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.67 51.0 4.69e-01 93.2% 63.2%
4034317 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 46.0 4.99e-01 89.2% 87.3%
4033484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 47.0 4.99e-01 90.5% 87.5%
3281945 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 53.0 4.96e-01 98.6% 73.3%
4870495 304.169.1.1 ↗ a+b two layers › Alpha-beta plaits › RspWYL1 C-terminal domain › RspWYL1 C-terminal domain › WYL 0.64 48.0 4.24e-01 93.2% 54.6%
4547801 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 46.0 4.38e-01 97.3% 64.4%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 38.0 4.24e-01 90.5% 81.8%
4087011 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.82e-01 97.3% 73.7%
3389169 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 41.0 3.96e-01 98.6% 63.5%
3486327 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 40.0 4.30e-01 100.0% 86.7%
3671986 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.58 37.0 3.86e-01 90.5% 68.6%
3620094 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 39.0 4.29e-01 100.0% 92.7%
3581143 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.58 37.0 3.94e-01 89.2% 73.8%
4950396 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 37.0 4.10e-01 91.9% 85.5%
4881976 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.58 39.0 3.91e-01 100.0% 68.9%
4317035 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 40.0 3.88e-01 98.6% 64.7%
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 41.0 4.29e-01 97.3% 89.2%
4306285 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 41.0 4.20e-01 100.0% 84.3%
3240406 4.1.1.347 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.57 39.0 3.45e-01 94.6% 47.0%
499 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.56 48.0 4.69e-01 100.0% 98.8%
4002896 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 40.0 3.82e-01 100.0% 63.3%
3913334 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 35.0 3.62e-01 89.2% 68.6%
3936926 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 36.0 3.79e-01 89.2% 76.9%
3672445 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 35.0 2.91e-01 87.8% 34.5%
3719487 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.53 39.0 2.70e-01 78.4% 27.0%
3576438 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 39.0 3.70e-01 98.6% 65.6%
3842441 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 39.0 4.19e-01 93.2% 100.0%
3388630 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.53 44.0 4.38e-01 100.0% 90.0%
1824182 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.53 43.0 4.29e-01 100.0% 89.6%
3766287 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 44.0 4.06e-01 100.0% 72.0%
5025080 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 28.0 3.33e-01 83.8% 78.0%
3698757 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 39.0 3.60e-01 90.5% 62.0%
3617677 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 43.0 4.25e-01 97.3% 92.5%
3593635 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.81e-01 94.6% 74.5%
5000446 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.51 41.0 3.91e-01 91.9% 94.4%
3221547 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 43.0 4.21e-01 100.0% 91.3%
3449268 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 38.0 3.71e-01 90.5% 71.8%
3609256 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 40.0 3.89e-01 90.5% 77.6%
3842631 4.1.1.243 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.50 37.0 3.82e-01 93.2% 85.7%
4272478 810.1.1.9 ↗ a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › PF28338 0.50 38.0 2.85e-01 86.5% 63.2%