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HG796221.1__CDL65244.1__X__00007

Bact-Vir

HG796221.1__CDL65244.1__X__00007

Identity

Accession:
HG796221 ↗
Kingdom:
phage

Quality

81.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autonotataviridae› Ampunavirus› Burkholderia_phage_Bp-AMP4

TaxID: 1437329

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-51
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14657.13 best Arm-DNA-bind_4 23.6 4.10e-05 49.0% 36.2%
CATH (68)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hi9A02 3.30.1360.130 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Dipeptide transport protein 0.78 71.0 6.03e-01 100.0% 85.5%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.75 53.0 3.75e-01 77.6% 93.1%
2l2mA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.72 62.0 5.58e-01 100.0% 70.0%
2l6mA00 3.30.160.400 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.72 61.0 4.95e-01 100.0% 59.4%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 46.0 4.20e-01 71.4% 49.2%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.71 56.0 4.86e-01 98.0% 55.0%
3tw8A01 3.30.450.200 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module 0.70 59.0 4.39e-01 100.0% 35.5%
2qdeA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.69 59.0 4.26e-01 95.9% 70.6%
4wyqB00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 57.0 5.08e-01 98.0% 72.0%
4xrtA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.69 46.0 3.34e-01 71.4% 91.5%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.68 57.0 4.09e-01 93.9% 75.7%
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 47.0 3.52e-01 75.5% 35.8%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 45.0 2.75e-01 71.4% 10.7%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 56.0 5.16e-01 100.0% 76.1%
1mhxA00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.66 49.0 4.50e-01 79.6% 63.1%
6ksrA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.66 49.0 3.48e-01 83.7% 43.1%
7dpyB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.66 47.0 3.91e-01 79.6% 44.6%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.66 45.0 4.44e-01 87.8% 66.7%
3zi1A02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.65 36.0 2.57e-01 93.9% 17.9%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.64 49.0 3.44e-01 87.8% 52.2%
3c8cB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.64 43.0 3.24e-01 71.4% 27.6%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.64 52.0 4.63e-01 100.0% 63.4%
1iyxA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.64 53.0 4.02e-01 95.9% 92.0%
2pw9C03 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.63 52.0 3.83e-01 93.9% 37.0%
4kcaA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 44.0 2.63e-01 73.5% 10.4%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.63 48.0 3.35e-01 87.8% 61.1%
3sszA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 52.0 3.93e-01 100.0% 48.1%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.62 47.0 3.90e-01 100.0% 45.6%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 53.0 4.02e-01 100.0% 38.6%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 53.0 4.35e-01 100.0% 52.1%
2d42A02 3.10.450.380 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 44.0 4.05e-01 77.6% 64.6%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 54.0 3.96e-01 100.0% 47.3%
7d58G02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 45.0 3.60e-01 79.6% 66.3%
3pg4A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.61 48.0 3.14e-01 89.8% 34.8%
1oo0A00 3.30.1560.10 Alpha Beta › 2-Layer Sandwich › Mago nashi protein › Mago nashi 0.61 47.0 3.48e-01 89.8% 86.1%
2lg1A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 50.0 3.85e-01 100.0% 40.0%
2jhnA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.61 42.0 3.30e-01 71.4% 99.1%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.60 41.0 3.01e-01 73.5% 25.5%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 45.0 3.72e-01 87.8% 52.9%
4khbC00 2.30.29.210 Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p 0.60 51.0 4.07e-01 100.0% 52.8%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 49.0 3.42e-01 91.8% 87.7%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 49.0 3.46e-01 91.8% 57.7%
5inwA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.59 43.0 3.37e-01 79.6% 59.3%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 51.0 3.93e-01 100.0% 43.5%
1wuoA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.59 47.0 3.08e-01 87.8% 34.7%
1hp7A01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.59 45.0 3.69e-01 85.7% 65.3%
1ykdB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.59 48.0 3.37e-01 100.0% 56.1%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 44.0 4.31e-01 91.8% 78.2%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.57 45.0 3.41e-01 91.8% 53.7%
2g8yA02 3.30.1370.60 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain 0.56 44.0 2.93e-01 89.8% 19.7%
1x31A02 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.56 41.0 2.44e-01 77.6% 21.5%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 44.0 3.58e-01 100.0% 64.7%
1st8A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 40.0 2.50e-01 81.6% 26.4%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 42.0 3.60e-01 98.0% 48.8%
2ml5A00 3.10.450.410 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 45.0 3.32e-01 98.0% 74.2%
4hslA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 42.0 3.12e-01 100.0% 73.5%
6wqbA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 43.0 3.10e-01 91.8% 52.0%
4r9iA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 42.0 3.36e-01 87.8% 66.0%
3rioA01 2.30.24.10 Mainly Beta › Roll › Transcription Regulation, Sacy; Chain A › CAT RNA-binding domain 0.53 36.0 3.28e-01 87.8% 51.5%
1gd5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 42.0 3.29e-01 100.0% 74.6%
3m4aA03 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.52 40.0 3.08e-01 85.7% 50.8%
1wtjA02 3.30.1370.60 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain 0.52 42.0 2.94e-01 100.0% 57.1%
2l8oA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 40.0 2.98e-01 89.8% 95.1%
5cflA02 3.40.50.12100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein 0.52 45.0 3.20e-01 100.0% 67.3%
1a31A03 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.51 40.0 2.96e-01 91.8% 40.0%
4emtA02 3.40.50.12100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein 0.51 46.0 3.31e-01 100.0% 62.7%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 33.0 3.39e-01 79.6% 68.8%
5t1dB00 3.10.390.20 Alpha Beta › Roll › SAND domain › Viral glycoprotein L 0.51 36.0 2.95e-01 79.6% 37.4%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3969097 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.92 79.0 7.91e-01 100.0% 90.0%
3943930 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.87 78.0 7.75e-01 100.0% 94.0%
3954708 4325.1.1.9 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › PF26003 0.84 74.0 7.37e-01 100.0% 94.0%
4020977 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.79 69.0 4.54e-01 100.0% 28.4%
3474293 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.79 67.0 4.78e-01 100.0% 32.0%
3700429 223.2.1.6 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.78 67.0 4.83e-01 100.0% 34.3%
3593375 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.78 63.0 5.94e-01 91.8% 100.0%
4031151 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.77 52.0 4.54e-01 71.4% 48.0%
3593291 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.77 66.0 4.72e-01 100.0% 33.1%
5075465 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.77 67.0 6.28e-01 100.0% 78.3%
3495405 3131.1.1.1 ↗ a+b two layers › FYR domain › FYR domain › FYR domain › FYRN,FYRC 0.76 68.0 4.76e-01 100.0% 33.3%
3221077 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.76 68.0 5.75e-01 100.0% 61.3%
3312151 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.75 66.0 4.62e-01 100.0% 31.6%
3472961 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.74 63.0 4.56e-01 100.0% 32.7%
3531090 223.2.1.6 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.74 63.0 4.36e-01 100.0% 29.7%
3887913 223.2.1.40 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DENN 0.73 63.0 4.45e-01 100.0% 31.6%
4297945 4325.1.1.1 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.73 62.0 5.99e-01 100.0% 85.5%
6667 4221.1.1.1 ↗ a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like › DUF1797 0.72 56.0 4.83e-01 91.8% 53.8%
4140206 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.72 62.0 5.26e-01 100.0% 61.2%
3623902 223.2.1.4 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.72 61.0 4.35e-01 100.0% 32.5%
3887124 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.72 62.0 4.17e-01 100.0% 26.9%
4929364 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.71 54.0 4.96e-01 83.7% 69.2%
4032337 4964.1.1.0 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.71 40.0 2.75e-01 89.8% 17.0%
3551723 223.2.1.4 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.71 60.0 4.29e-01 100.0% 30.6%
3017675 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.71 60.0 5.31e-01 100.0% 74.7%
3624850 331.9.1.9 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 0.70 55.0 4.33e-01 87.8% 85.7%
3520837 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 48.0 3.43e-01 75.5% 25.9%
4182599 223.2.1.20 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_1 0.69 57.0 4.15e-01 100.0% 33.5%
4653150 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.69 54.0 4.21e-01 87.8% 59.1%
3814814 2003.1.2.6 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.69 46.0 2.74e-01 77.6% 9.7%
3431181 2003.1.2.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.69 49.0 2.93e-01 77.6% 10.7%
4423214 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.69 57.0 4.60e-01 100.0% 50.5%
3615163 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 53.0 4.07e-01 83.7% 40.2%
3543887 330.1.1.6 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C 0.68 58.0 4.67e-01 100.0% 54.0%
3170899 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.67 56.0 4.49e-01 100.0% 45.7%
4048167 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.67 58.0 5.22e-01 100.0% 70.0%
4194213 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.67 57.0 5.07e-01 95.9% 68.6%
3600888 11.8.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.67 53.0 3.52e-01 87.8% 31.8%
4939488 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.67 58.0 3.57e-01 98.0% 19.7%
4106867 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.67 57.0 4.08e-01 95.9% 33.6%
3743248 220.1.1.70 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 0.66 58.0 3.99e-01 100.0% 42.3%
3685219 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 54.0 3.96e-01 100.0% 32.4%
3707461 218.1.1.2 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.66 56.0 4.17e-01 100.0% 53.3%
3595055 218.1.1.0 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.66 54.0 4.01e-01 100.0% 86.9%
3941423 252.2.1.5 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 0.66 56.0 4.75e-01 100.0% 62.4%
4942959 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.66 54.0 3.51e-01 93.9% 69.1%
4089593 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.65 56.0 4.21e-01 100.0% 39.2%
3183690 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 59.0 4.10e-01 100.0% 34.0%
3276895 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 51.0 2.97e-01 85.7% 16.1%
1780023 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.65 44.0 3.60e-01 71.4% 37.6%
4358998 223.3.1.2 ↗ a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 0.65 52.0 3.94e-01 100.0% 34.8%
4025559 5.1.4.74 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.64 57.0 3.34e-01 100.0% 21.8%
4026587 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.64 46.0 3.06e-01 77.6% 30.5%
3887822 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 53.0 3.91e-01 100.0% 36.0%
3670358 218.1.1.2 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.63 52.0 4.12e-01 91.8% 56.0%
3247407 220.1.1.50 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 0.63 46.0 3.50e-01 79.6% 40.8%
4019656 220.1.1.211 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7612 0.63 49.0 3.64e-01 91.8% 32.6%
4975450 300.1.1.0 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.62 45.0 3.40e-01 81.6% 32.2%
3606311 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 50.0 4.49e-01 100.0% 62.7%
4260316 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.62 53.0 4.57e-01 100.0% 61.3%
4207802 2.1.1.271 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26390 0.61 48.0 3.85e-01 87.8% 51.0%
3798928 59.1.4.2 ↗ beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › DUF3591 0.61 47.0 2.72e-01 100.0% 8.8%
4945983 300.1.1.0 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.60 42.0 3.16e-01 77.6% 28.5%
4160544 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.60 48.0 3.49e-01 91.8% 76.0%
3859768 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 54.0 3.67e-01 100.0% 33.7%
2810982 11.1.1.281 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MALT1_Ig 0.60 47.0 3.45e-01 87.8% 48.5%
3346659 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.59 46.0 3.67e-01 85.7% 50.0%
3624046 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 51.0 3.85e-01 100.0% 40.0%
3517149 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 48.0 2.93e-01 100.0% 19.3%
3505247 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 49.0 4.09e-01 100.0% 54.4%
3383138 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 44.0 3.83e-01 85.7% 69.2%
5017958 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.57 48.0 3.48e-01 100.0% 60.0%
3560129 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.57 41.0 3.14e-01 77.6% 55.2%
4954874 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 45.0 3.99e-01 93.9% 97.3%
3422528 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 44.0 4.27e-01 100.0% 78.3%
3293481 861.1.1.1 ↗ a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein › Mago_nashi 0.51 37.0 2.95e-01 83.7% 92.8%
4946589 300.1.1.0 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.51 36.0 2.54e-01 77.6% 25.6%
3953386 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 45.0 3.10e-01 100.0% 99.4%
D2 medium residues 59-93
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3crjC00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 52.0 3.38e-01 91.4% 17.9%
2ot4A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.67 50.0 3.71e-01 91.4% 29.9%
2jx4A01 6.10.140.460 Special › Helix non-globular › Helix Hairpins › 0.61 44.0 4.22e-01 94.3% 64.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4214655 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.83 65.0 4.97e-01 88.6% 38.7%
3698165 192.15.1.77 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › OST3_OST6 0.80 66.0 4.66e-01 100.0% 74.8%
3357448 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.76 58.0 5.18e-01 85.7% 82.0%
3716699 2003.1.5.95 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM13 0.61 48.0 2.84e-01 100.0% 17.8%