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HM004124.1__ADG60003.1__Acj9p103__00103
Bact-VirHM004124.1__ADG60003.1__Acj9p103__00103
Identity
- Accession:
- HM004124 ↗
- Kingdom:
- phage
Quality
69.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Acajnonavirus›
Acinetobacter_phage_Acj9
TaxID: 760939
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-64
Domain cluster:
rep: MZ326867.1__QYW02519.1__CPT_Silvanus_045__00045__D8-69
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rq1D01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.77 | 65.0 | 4.69e-01 | 94.5% | 58.8% |
| 2o8bA04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.76 | 63.0 | 5.58e-01 | 94.5% | 92.8% |
| 1uu1B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.75 | 56.0 | 4.23e-01 | 80.0% | 67.2% |
| 1ewqA04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.74 | 64.0 | 4.84e-01 | 100.0% | 67.6% |
| 3p1tA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.71 | 52.0 | 4.05e-01 | 80.0% | 76.2% |
| 3getA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.71 | 55.0 | 4.68e-01 | 87.3% | 77.7% |
| 2ej9A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.70 | 53.0 | 3.68e-01 | 83.6% | 24.5% |
| 3ly1D01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.68 | 57.0 | 4.37e-01 | 94.5% | 57.4% |
| 3a2bA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.68 | 47.0 | 3.61e-01 | 74.5% | 73.5% |
| 2dr1A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.67 | 55.0 | 4.09e-01 | 89.1% | 55.6% |
| 3a7rA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.66 | 46.0 | 3.08e-01 | 85.5% | 16.9% |
| 2e9yB00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.66 | 49.0 | 3.10e-01 | 81.8% | 37.2% |
| 2o1bA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.65 | 50.0 | 3.77e-01 | 89.1% | 53.3% |
| 3hdoA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.64 | 49.0 | 3.85e-01 | 87.3% | 55.4% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.64 | 49.0 | 3.67e-01 | 87.3% | 33.8% |
| 5yk4A04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.63 | 51.0 | 4.05e-01 | 100.0% | 67.6% |
| 4lqbA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.63 | 42.0 | 3.21e-01 | 70.9% | 31.5% |
| 7ewfB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 45.0 | 4.03e-01 | 76.4% | 56.0% |
| 3zihA00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.62 | 43.0 | 3.85e-01 | 72.7% | 50.6% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.61 | 43.0 | 3.78e-01 | 76.4% | 80.0% |
| 4r5zA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 46.0 | 3.67e-01 | 87.3% | 53.2% |
| 2jrbA00 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.59 | 42.0 | 4.11e-01 | 80.0% | 67.7% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.59 | 45.0 | 3.80e-01 | 83.6% | 51.0% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.58 | 39.0 | 3.26e-01 | 70.9% | 43.1% |
| 1yloA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.58 | 41.0 | 2.71e-01 | 78.2% | 36.4% |
| 1jyoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.56 | 40.0 | 3.14e-01 | 80.0% | 46.2% |
| 1u0tB01 | 3.40.50.10330 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.52 | 35.0 | 2.68e-01 | 74.5% | 28.1% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4003270 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.82 | 57.0 | 3.45e-01 | 94.5% | 12.1% |
| 3720126 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.79 | 68.0 | 4.12e-01 | 96.4% | 19.7% |
| 3238018 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.78 | 66.0 | 4.06e-01 | 94.5% | 23.5% |
| 4190224 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.74 | 64.0 | 3.79e-01 | 100.0% | 20.7% |
| 4187983 | 314.1.1.12 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat | 0.74 | 58.0 | 3.92e-01 | 89.1% | 23.4% |
| 4160947 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.74 | 64.0 | 4.02e-01 | 100.0% | 30.2% |
| 4159140 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.74 | 64.0 | 3.73e-01 | 100.0% | 19.4% |
| 4135238 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.74 | 65.0 | 4.07e-01 | 100.0% | 33.1% |
| 4285351 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.74 | 64.0 | 3.99e-01 | 100.0% | 29.2% |
| 4569662 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.74 | 63.0 | 3.97e-01 | 100.0% | 29.7% |
| 3592627 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.74 | 66.0 | 4.19e-01 | 100.0% | 22.7% |
| 3255991 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.73 | 64.0 | 4.02e-01 | 100.0% | 28.7% |
| 4282238 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.73 | 64.0 | 3.55e-01 | 100.0% | 12.1% |
| None | — | 0.73 | 62.0 | 3.50e-01 | 100.0% | 13.1% | |
| 4996738 | 2484.1.1.291 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_V | 0.73 | 62.0 | 3.51e-01 | 100.0% | 13.4% |
| 4951445 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.72 | 62.0 | 3.90e-01 | 100.0% | 30.2% |
| 4181298 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.72 | 62.0 | 3.68e-01 | 100.0% | 21.1% |
| 4155387 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.72 | 62.0 | 3.86e-01 | 100.0% | 28.7% |
| 4088876 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 61.0 | 3.42e-01 | 100.0% | 12.6% |
| 5060078 | 2484.1.1.291 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_V | 0.72 | 62.0 | 3.49e-01 | 100.0% | 13.4% |
| 3795771 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.72 | 62.0 | 3.75e-01 | 100.0% | 15.3% |
| 4095689 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.71 | 62.0 | 3.89e-01 | 100.0% | 30.2% |
| 3270591 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.70 | 59.0 | 3.74e-01 | 100.0% | 30.0% |
| 4989009 | 2484.1.1.331 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_III | 0.70 | 61.0 | 3.64e-01 | 100.0% | 21.4% |
| None | — | 0.70 | 62.0 | 3.40e-01 | 96.4% | 19.6% | |
| 4200482 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.70 | 59.0 | 4.89e-01 | 94.5% | 77.6% |
| 4078587 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.70 | 56.0 | 3.54e-01 | 94.5% | 22.8% |
| 4441223 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.69 | 51.0 | 3.64e-01 | 78.2% | 37.3% |
| 4378342 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.69 | 57.0 | 3.43e-01 | 100.0% | 20.0% |
| 4680501 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.69 | 57.0 | 3.64e-01 | 100.0% | 30.2% |
| 4084820 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.68 | 56.0 | 3.62e-01 | 100.0% | 31.4% |
| 4076057 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.68 | 57.0 | 3.60e-01 | 100.0% | 29.4% |
| 4416596 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.67 | 56.0 | 3.58e-01 | 100.0% | 29.8% |
| None | — | 0.67 | 56.0 | 3.19e-01 | 100.0% | 13.5% | |
| None | — | 0.67 | 55.0 | 3.14e-01 | 100.0% | 13.1% | |
| 4636696 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.66 | 54.0 | 3.50e-01 | 100.0% | 23.9% |
| 3291545 | 3859.1.1.0 ↗ | alpha arrays › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain › uncharacterized protein BT_1490 C-terminal domain | 0.66 | 49.0 | 3.82e-01 | 83.6% | 36.0% |
| 4600010 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.65 | 54.0 | 3.46e-01 | 100.0% | 29.8% |
| 54696 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.64 | 53.0 | 3.42e-01 | 100.0% | 31.0% |
| 5005103 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 42.0 | 3.46e-01 | 70.9% | 34.5% |
| 4515483 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.64 | 52.0 | 3.35e-01 | 100.0% | 46.8% |
| 5057036 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.63 | 49.0 | 3.70e-01 | 89.1% | 71.3% |
| 1761201 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.63 | 42.0 | 4.06e-01 | 70.9% | 64.1% |
| 4813157 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.62 | 45.0 | 4.19e-01 | 76.4% | 62.7% |
| 2354 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.61 | 40.0 | 4.27e-01 | 72.7% | 80.4% |
| 3171587 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.61 | 52.0 | 3.09e-01 | 96.4% | 78.4% |
| 3292448 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.60 | 44.0 | 3.00e-01 | 78.2% | 91.7% |
| 4121534 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.60 | 49.0 | 3.14e-01 | 100.0% | 26.7% |
| 4426232 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.58 | 43.0 | 3.70e-01 | 87.3% | 48.9% |
| 4569447 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.57 | 43.0 | 3.38e-01 | 83.6% | 56.8% |
| 3677939 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.57 | 49.0 | 3.36e-01 | 96.4% | 47.9% |
| 3279654 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.55 | 41.0 | 3.19e-01 | 89.1% | 33.3% |
| 4976589 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.55 | 38.0 | 3.23e-01 | 74.5% | 42.1% |
| 4493573 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.53 | 44.0 | 3.12e-01 | 98.2% | 52.0% |
| 4407103 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.53 | 35.0 | 3.43e-01 | 74.5% | 61.7% |
| 3213954 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.53 | 44.0 | 3.04e-01 | 100.0% | 26.8% |
| 3395053 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.51 | 33.0 | 3.07e-01 | 72.7% | 52.9% |