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HM032710.1__ADI96310.1__Ac42p072__00072

Bact-Vir

HM032710.1__ADI96310.1__Ac42p072__00072

Identity

Accession:
HM032710 ↗
Kingdom:
phage

Quality

80.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-77
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11113.15 best Phage_head_chap 72.9 2.10e-20 77.3% 100.0%
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6x6aA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.72 58.0 3.83e-01 85.3% 42.3%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.69 45.0 5.04e-01 72.0% 89.5%
4lb0A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.67 48.0 3.67e-01 74.7% 39.0%
3qh4A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.67 57.0 3.78e-01 96.0% 36.3%
6r77A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.63 46.0 3.56e-01 77.3% 39.8%
1vloA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.61 42.0 4.02e-01 73.3% 62.6%
2azpA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.61 45.0 3.53e-01 78.7% 42.7%
4ns4A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 50.0 3.50e-01 96.0% 38.4%
2jmuA01 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.60 46.0 3.33e-01 82.7% 72.8%
3n7zA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 49.0 4.18e-01 94.7% 59.8%
6y43A01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.59 38.0 3.05e-01 73.3% 32.7%
1m1jE01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.59 38.0 2.97e-01 73.3% 30.4%
3obfA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.59 42.0 3.29e-01 77.3% 93.2%
3r4kA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.59 42.0 3.27e-01 77.3% 93.9%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 34.0 3.87e-01 88.0% 78.2%
3ghgB02 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.58 41.0 2.88e-01 76.0% 56.1%
3zqsA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.58 41.0 3.91e-01 78.7% 63.6%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.57 48.0 4.06e-01 93.3% 64.8%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.57 40.0 3.38e-01 74.7% 94.7%
2dawA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.57 42.0 3.59e-01 82.7% 72.9%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.56 42.0 3.88e-01 81.3% 59.8%
2wqlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 41.0 3.30e-01 77.3% 83.6%
2ebkA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.56 42.0 3.61e-01 82.7% 60.2%
1x23B00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.56 41.0 3.33e-01 80.0% 50.7%
4zbgA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 45.0 3.68e-01 93.3% 51.9%
1kyfA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.55 43.0 3.84e-01 88.0% 93.8%
2daxA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.55 43.0 3.53e-01 86.7% 66.7%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.54 34.0 2.85e-01 73.3% 33.8%
4r62A00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.54 38.0 3.16e-01 76.0% 47.7%
1tyeA00 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.53 45.0 2.85e-01 100.0% 55.1%
2avxA00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.53 38.0 2.98e-01 76.0% 82.5%
1cg2A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.53 46.0 3.16e-01 98.7% 89.6%
1uzxA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.52 40.0 3.38e-01 86.7% 60.7%
2o0yB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.52 38.0 2.93e-01 77.3% 94.9%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 33.0 3.54e-01 77.3% 77.4%
2budA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 36.0 3.44e-01 80.0% 60.9%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 34.0 3.64e-01 74.7% 84.1%
5dm6S01 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.51 37.0 3.61e-01 85.3% 69.8%
2h2yA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.51 38.0 3.38e-01 82.7% 66.4%
2hdlA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 30.0 3.06e-01 88.0% 55.8%
2yz0A00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.50 40.0 3.33e-01 88.0% 57.2%
1t3yA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.50 36.0 3.07e-01 77.3% 62.6%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 42.0 3.72e-01 97.3% 91.3%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3439604 7579.1.1.3 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.66 50.0 3.42e-01 81.3% 43.8%
4859328 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.63 43.0 3.48e-01 70.7% 42.1%
4618123 286.1.1.4 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase 0.62 45.0 3.42e-01 76.0% 38.2%
3959053 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 50.0 3.82e-01 94.7% 83.2%
2803991 3209.1.1.1 a+b two layers › RPL28 › RPL28 › RPL28 › Ribosomal_L28e 0.58 41.0 3.32e-01 74.7% 59.7%
3252404 331.4.1.1 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.58 42.0 3.99e-01 82.7% 62.1%
4927548 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.56 40.0 3.46e-01 74.7% 74.2%
3798523 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 39.0 3.86e-01 73.3% 93.8%
4631988 304.25.1.0 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.55 39.0 2.98e-01 76.0% 81.0%
4029544 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 35.0 2.85e-01 70.7% 34.3%
5002750 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.55 38.0 3.48e-01 73.3% 77.1%
3960654 239.4.1.2 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › GSIII_N 0.55 36.0 3.19e-01 76.0% 48.6%
3479080 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.54 39.0 3.71e-01 77.3% 63.6%
3610972 330.1.1.22 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 0.54 38.0 3.21e-01 73.3% 66.9%
3476907 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 44.0 2.99e-01 93.3% 31.2%
3265334 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.54 41.0 3.67e-01 82.7% 68.2%
3255549 216.1.1.9 a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d2 0.53 41.0 3.53e-01 81.3% 86.1%
3738978 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 37.0 3.05e-01 73.3% 78.6%
3282879 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 35.0 2.63e-01 86.7% 25.0%
3490245 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 37.0 3.53e-01 74.7% 75.6%
4029815 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 44.0 3.67e-01 92.0% 88.5%
3793962 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.52 35.0 3.41e-01 78.7% 58.9%
3739683 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.52 36.0 3.18e-01 73.3% 87.3%
5029243 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.51 36.0 3.16e-01 76.0% 95.0%
3711065 330.1.1.22 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 0.51 35.0 3.10e-01 73.3% 75.7%
3700285 330.1.1.22 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 0.51 39.0 3.26e-01 84.0% 68.9%
5051718 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 41.0 2.69e-01 93.3% 51.6%
4977960 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 39.0 2.32e-01 85.3% 95.3%
5009939 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 39.0 3.51e-01 84.0% 87.6%