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HM032710.1__ADI96407.1__Ac42p169__00169
Bact-VirHM032710.1__ADI96407.1__Ac42p169__00169
Identity
- Accession:
- HM032710 ↗
- Kingdom:
- phage
Quality
88.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Acinetobacter_phage_Ac42
TaxID: 762660
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 86-183
Domain cluster:
rep: KU160494.1__ALY07239.1__VmeM32_00253__00244__D188-281
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08677.17 best | GP11 | 87.3 | 1.50e-24 | 100.0% | 45.4% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1el6A03 | 3.90.1160.10 | Alpha Beta › Alpha-Beta Complex › Baseplate Structural Protein Gp11; Chain: A, domain 3 › Baseplate structural protein gp11, finger domain | 0.97 | 94.0 | 8.96e-01 | 100.0% | 91.7% |
| 4on1A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.67 | 34.0 | 2.97e-01 | 78.6% | 33.8% |
| 4nx9A02 | 2.60.40.4390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 60.0 | 5.59e-01 | 100.0% | 87.6% |
| 1zu0A02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.65 | 44.0 | 4.31e-01 | 84.7% | 64.5% |
| 5iqaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 35.0 | 3.66e-01 | 74.5% | 58.9% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.62 | 47.0 | 4.85e-01 | 100.0% | 85.1% |
| 6j5tB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 35.0 | 3.27e-01 | 74.5% | 45.0% |
| 7vcnA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.60 | 39.0 | 3.90e-01 | 100.0% | 63.1% |
| 3hx9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 45.0 | 4.50e-01 | 100.0% | 91.8% |
| 4b09B02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 33.0 | 3.35e-01 | 81.6% | 64.3% |
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.51 | 42.0 | 2.68e-01 | 89.8% | 94.5% |
| 1i24A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 37.0 | 2.85e-01 | 76.5% | 57.2% |
| 5yjlB01 | 3.30.460.30 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Glutamyl-tRNA reductase, N-terminal domain | 0.51 | 42.0 | 3.61e-01 | 100.0% | 55.9% |
| 1yq5A00 | 2.60.120.670 | Mainly Beta › Sandwich › Jelly Rolls › Minor capsid protein. | 0.51 | 40.0 | 3.57e-01 | 100.0% | 59.0% |
| 2ztbA02 | 2.60.40.4280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 38.0 | 3.84e-01 | 100.0% | 79.8% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 270234 | 3019.1.1.2 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › GP11 | 0.97 | 94.0 | 9.12e-01 | 100.0% | 95.2% |
| 3670277 | 3012.1.1.1 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase | 0.73 | 37.0 | 4.18e-01 | 76.5% | 64.0% |
| 4302659 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.66 | 60.0 | 5.62e-01 | 100.0% | 94.2% |
| 4957085 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 37.0 | 4.47e-01 | 98.0% | 86.2% |
| 4460828 | 3618.1.1.1 ↗ | beta complex topology › Flagellin beta sheet domain › Flagellin beta sheet domain › Flagellin beta sheet domain › Flagellin_IN | 0.62 | 55.0 | 5.43e-01 | 100.0% | 95.2% |
| 3789606 | 4014.1.1.0 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase | 0.60 | 43.0 | 3.53e-01 | 90.8% | 42.9% |
| 2409733 | 11.1.4.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF7601 | 0.60 | 38.0 | 3.48e-01 | 100.0% | 49.2% |
| 4947594 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.59 | 34.0 | 3.89e-01 | 96.9% | 76.0% |
| 3994984 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.56 | 35.0 | 4.09e-01 | 75.5% | 93.8% |
| 4963606 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.53 | 43.0 | 3.43e-01 | 89.8% | 68.1% |
| 3189018 | 898.1.1.1 ↗ | a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › Ribosomal_L1 | 0.52 | 45.0 | 4.03e-01 | 100.0% | 98.0% |
| 4991102 | 304.136.1.0 ↗ | a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain | 0.52 | 43.0 | 3.06e-01 | 91.8% | 61.5% |
| 5025287 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 32.0 | 3.51e-01 | 88.8% | 78.7% |
| 3362479 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.51 | 36.0 | 3.09e-01 | 75.5% | 80.6% |
| 4243735 | 2484.1.1.36 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 | 0.51 | 41.0 | 3.16e-01 | 87.8% | 87.4% |
| 2636124 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.51 | 44.0 | 3.43e-01 | 100.0% | 55.6% |
| 3590547 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.50 | 41.0 | 3.79e-01 | 90.8% | 96.9% |
D2
medium
residues 15-82
Domain cluster:
rep: OQ361773.1__WDS61704.1__X__00162__D1-68
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08677.17 best | GP11 | 66.1 | 4.80e-18 | 100.0% | 31.0% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1el6A01 | 1.10.286.30 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › Baseplate structural protein GP11, N-terminal domain | 0.98 | 70.0 | 7.98e-01 | 73.5% | 96.2% |
| 1uhrA00 | 1.10.245.10 | Mainly Alpha › Orthogonal Bundle › MDM2 › SWIB/MDM2 domain | 0.60 | 35.0 | 3.16e-01 | 79.4% | 40.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1832327 | 877.1.1.4 ↗ | a+b duplicates or obligate multimers › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › GP11 | 0.94 | 89.0 | 8.30e-01 | 100.0% | 84.0% |
| 3180087 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 48.0 | 3.13e-01 | 94.1% | 62.5% |
| 3635087 | 327.11.2.60 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_SLS1_2 | 0.51 | 37.0 | 3.24e-01 | 79.4% | 67.3% |