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HM114277.1__AEQ20960.1__E3_0470__00050

Bact-Vir

HM114277.1__AEQ20960.1__E3_0470__00050

Identity

Accession:
HM114277 ↗
Kingdom:
phage

Quality

57.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhodococcus_phage_E3

TaxID: 1007869

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-62
PDB
D2 medium residues 63-117
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4urjD00 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.59 43.0 3.17e-01 83.6% 58.0%
1f02T00 4.10.820.10 Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain 0.54 37.0 3.53e-01 72.7% 80.3%
7plsA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 33.0 2.87e-01 74.5% 35.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3225917 2498.1.1.23 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M49 0.54 41.0 2.36e-01 89.1% 93.3%