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HM114277.1__AEQ21051.1__E3_1350__00143
Bact-VirHM114277.1__AEQ21051.1__E3_1350__00143
Identity
- Accession:
- HM114277 ↗
- Kingdom:
- phage
Quality
77.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 53-122
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 37.0 | 3.97e-01 | 88.6% | 61.7% |
| 4pswA03 | 1.10.10.390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.64 | 37.0 | 4.07e-01 | 97.1% | 72.2% |
| 5fb0A02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.59 | 50.0 | 4.41e-01 | 100.0% | 89.3% |
| 2rcnA03 | 1.10.40.50 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Probable gtpase engc; domain 3 | 0.58 | 43.0 | 4.54e-01 | 80.0% | 91.9% |
| 2qm8A03 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.58 | 40.0 | 4.11e-01 | 90.0% | 78.5% |
| 3mc1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 45.0 | 4.59e-01 | 90.0% | 91.0% |
| 1hi8A02 | 1.10.490.60 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phage p2 RNA dependent RNA polymerase domain | 0.55 | 47.0 | 3.80e-01 | 98.6% | 79.2% |
| 6yttA01 | 1.10.8.190 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 | 0.54 | 44.0 | 4.02e-01 | 94.3% | 77.0% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 36.0 | 3.08e-01 | 94.3% | 42.1% |
| 3zrpA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 44.0 | 3.72e-01 | 94.3% | 73.1% |
| 2etjA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 45.0 | 3.27e-01 | 98.6% | 40.0% |
| 2gytA01 | 1.10.287.2070 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 42.0 | 4.19e-01 | 92.9% | 91.5% |
| 5h0pA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 42.0 | 3.83e-01 | 98.6% | 89.2% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.51 | 37.0 | 3.43e-01 | 80.0% | 93.6% |
| 2dkzA01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.50 | 35.0 | 3.75e-01 | 75.7% | 98.4% |
| 4q28A00 | 3.30.160.780 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 40.0 | 3.46e-01 | 87.1% | 57.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3737108 | 509.1.1.1 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH | 0.63 | 42.0 | 4.40e-01 | 98.6% | 75.4% |
| 4004038 | 509.1.1.1 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH | 0.60 | 41.0 | 4.40e-01 | 98.6% | 85.0% |
| 4025156 | 140.1.1.8 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 | 0.59 | 40.0 | 2.78e-01 | 70.0% | 38.1% |
| 4927557 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.57 | 43.0 | 3.66e-01 | 80.0% | 49.6% |
| 3785036 | 633.1.1.0 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain | 0.55 | 48.0 | 4.11e-01 | 100.0% | 84.3% |
| 3735883 | 2004.1.1.25 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C,SnAC | 0.55 | 46.0 | 2.72e-01 | 100.0% | 27.6% |
| 3604853 | 132.1.1.0 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) | 0.54 | 48.0 | 3.59e-01 | 100.0% | 40.6% |
| 3465442 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.54 | 45.0 | 3.15e-01 | 100.0% | 49.2% |
| 3810015 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.53 | 47.0 | 4.60e-01 | 100.0% | 94.7% |
| 3180029 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 42.0 | 4.01e-01 | 100.0% | 75.6% |
| 5005290 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.52 | 34.0 | 3.41e-01 | 98.6% | 65.7% |
| 3485281 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 44.0 | 3.03e-01 | 100.0% | 33.5% |
| 3282040 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.50 | 42.0 | 3.98e-01 | 94.3% | 83.5% |
| 4633037 | 310.1.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N | 0.50 | 43.0 | 3.78e-01 | 100.0% | 76.4% |