←Back to structures

HM114315.1__ADJ19370.1__Acj133p023__00023

Bact-Vir

HM114315.1__ADJ19370.1__Acj133p023__00023

Identity

Accession:
HM114315 ↗
Kingdom:
phage

Quality

70.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Centumtrigintavirus› Acinetobacter_phage_133

TaxID: 2919552

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-87
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ox7A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.71 54.0 5.98e-01 80.2% 100.0%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.60 49.0 4.09e-01 88.4% 99.3%
2d9rA00 2.40.30.100 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › AF2212/PG0164-like 0.59 41.0 4.14e-01 70.9% 72.9%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.59 41.0 4.01e-01 72.1% 76.3%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 3.92e-01 80.2% 86.3%
1krhA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 39.0 3.81e-01 70.9% 76.3%
1ep3B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 41.0 3.99e-01 76.7% 77.8%
2ph5A02 3.30.360.30 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › homospermidine synthase like 0.56 46.0 3.20e-01 89.5% 77.7%
2bonA02 2.60.200.40 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.54 39.0 3.34e-01 76.7% 91.3%
1mrzB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.54 40.0 3.69e-01 77.9% 84.8%
2qhlD00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 38.0 3.54e-01 74.4% 73.4%
1aw8B00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.54 40.0 3.96e-01 88.4% 74.7%
4n0rA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 31.0 3.20e-01 81.4% 57.6%
6grqA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 36.0 3.50e-01 70.9% 85.9%
8ornD01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.53 39.0 3.11e-01 77.9% 92.6%
2qeaB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 38.0 3.17e-01 79.1% 42.3%
3besR02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.57e-01 77.9% 81.1%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 38.0 3.54e-01 79.1% 73.7%
3v76A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 35.0 3.46e-01 72.1% 65.6%
1x1fA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 41.0 3.42e-01 86.0% 61.7%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 38.0 2.46e-01 80.2% 48.1%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4097843 4.11.1.6 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 0.61 42.0 3.41e-01 70.9% 58.7%
3597820 1.1.7.24 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.61 43.0 3.92e-01 74.4% 82.6%
3971620 1.1.7.88 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.61 43.0 3.53e-01 73.3% 73.3%
1527468 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.60 46.0 4.22e-01 81.4% 76.6%
3196006 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 43.0 3.59e-01 75.6% 75.9%
4007999 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.59 40.0 3.48e-01 70.9% 45.9%
3488502 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 42.0 3.77e-01 75.6% 70.8%
4032674 1.1.7.88 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.58 41.0 3.58e-01 73.3% 79.2%
3941958 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 42.0 4.18e-01 75.6% 94.4%
3584109 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 44.0 3.68e-01 80.2% 78.5%
4236508 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 42.0 3.52e-01 75.6% 60.7%
4010630 2004.1.1.10 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab 0.57 42.0 2.70e-01 77.9% 53.3%
3697717 220.1.1.89 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_4 0.56 41.0 3.28e-01 76.7% 73.3%
3173668 220.1.1.57 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_20 0.55 43.0 3.64e-01 84.9% 68.1%
3895407 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 43.0 3.68e-01 87.2% 64.1%
3486369 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 41.0 4.24e-01 81.4% 98.8%
3252263 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 43.0 4.11e-01 86.0% 85.0%
4001211 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 37.0 3.82e-01 83.7% 76.9%
3255028 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 44.0 3.54e-01 89.5% 60.0%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 37.0 3.95e-01 73.3% 97.3%
3513347 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 41.0 4.09e-01 82.6% 88.9%
3555736 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 44.0 3.70e-01 91.9% 65.3%
3842150 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 39.0 3.16e-01 79.1% 75.4%
3490661 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 39.0 3.13e-01 77.9% 73.5%
3557363 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 40.0 3.48e-01 83.7% 66.7%
3908892 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 41.0 3.53e-01 84.9% 86.7%
4027577 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 40.0 3.56e-01 83.7% 80.8%
3339984 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 42.0 3.79e-01 89.5% 75.8%
3473585 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.51 40.0 3.41e-01 83.7% 67.9%
4229185 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.50 37.0 3.15e-01 76.7% 52.9%
3527475 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.50 41.0 3.45e-01 88.4% 71.0%
3399812 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.50 41.0 3.74e-01 86.0% 70.0%
D2 medium residues 103-140
PDB