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HM114315.1__ADJ19379.1__Acj133p032__00032

Bact-Vir

HM114315.1__ADJ19379.1__Acj133p032__00032

Identity

Accession:
HM114315 ↗
Kingdom:
phage

Quality

91.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 40-98
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 63.0 4.99e-01 100.0% 83.7%
2g47A03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.67 47.0 3.16e-01 100.0% 19.4%
2ja9A02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.67 43.0 3.83e-01 98.3% 45.2%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 56.0 4.64e-01 94.9% 87.6%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 39.0 3.61e-01 98.3% 48.0%
2nnnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 4.36e-01 100.0% 77.3%
3zmdA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 4.18e-01 100.0% 69.6%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 47.0 3.94e-01 81.4% 81.0%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.26e-01 84.7% 97.8%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 4.05e-01 100.0% 67.3%
7d3uC01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 54.0 4.53e-01 100.0% 58.9%
3nqoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 3.88e-01 100.0% 58.2%
3broD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 55.0 4.23e-01 100.0% 92.5%
1hbxA01 3.40.1810.10 Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box 0.62 40.0 3.78e-01 100.0% 54.9%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 51.0 3.95e-01 100.0% 70.0%
4jz6A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.61 54.0 3.52e-01 100.0% 54.9%
3go9A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.60 53.0 3.64e-01 100.0% 67.7%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.60 51.0 4.43e-01 98.3% 64.9%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 4.17e-01 100.0% 88.7%
1go4A00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.58 51.0 3.57e-01 100.0% 31.6%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 51.0 3.90e-01 100.0% 76.6%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 4.05e-01 94.9% 86.4%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 51.0 3.93e-01 100.0% 89.8%
6lpnA04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 47.0 4.06e-01 93.2% 68.4%
1e6vB02 1.20.840.10 Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal 0.57 45.0 2.97e-01 93.2% 24.9%
3v3kD00 1.20.1260.90 Mainly Alpha › Up-down Bundle › Ferritin › 0.56 48.0 3.53e-01 100.0% 34.8%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.53e-01 83.1% 85.8%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 46.0 3.64e-01 96.6% 52.3%
3s6pG00 6.10.140.1660 Special › Helix non-globular › Helix Hairpins › 0.55 41.0 3.95e-01 89.8% 69.4%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 3.61e-01 84.7% 98.9%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.54 43.0 4.12e-01 91.5% 91.7%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 45.0 3.39e-01 93.2% 91.5%
3mahA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 44.0 4.23e-01 93.2% 79.7%
7ovuA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 43.0 3.14e-01 96.6% 97.9%
1vlrA01 3.30.200.40 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Scavenger mRNA decapping enzyme, N-terminal domain 0.53 34.0 3.01e-01 78.0% 39.8%
4i8qA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.53 43.0 2.85e-01 100.0% 36.4%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 46.0 3.77e-01 100.0% 71.6%
3pieA02 3.30.1370.250 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.52 44.0 3.82e-01 100.0% 97.0%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 46.0 3.81e-01 100.0% 92.3%
7l9pK01 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.52 42.0 3.40e-01 96.6% 45.4%
2cteA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.52 39.0 3.60e-01 83.1% 81.0%
1vbkA01 3.30.70.1510 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like 0.52 42.0 3.82e-01 93.2% 69.9%
1p9oA00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.51 42.0 2.85e-01 98.3% 87.4%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.51 42.0 3.51e-01 100.0% 75.4%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.51 42.0 3.88e-01 91.5% 80.0%
5kfzA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.51 44.0 3.52e-01 100.0% 56.1%
3gr5A02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 41.0 3.93e-01 91.5% 82.4%
3getA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.50 41.0 3.55e-01 91.5% 85.1%
2i5bA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.50 40.0 2.71e-01 94.9% 27.1%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4595166 5076.2.1.0 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ 0.72 61.0 4.18e-01 100.0% 29.8%
3461579 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.64 46.0 3.35e-01 76.3% 92.1%
3213400 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.63 45.0 3.46e-01 76.3% 90.0%
3628572 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.62 43.0 3.50e-01 76.3% 82.4%
4995767 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.62 52.0 3.44e-01 100.0% 28.5%
3519143 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.62 53.0 3.39e-01 100.0% 20.0%
3998938 6110.1.1.1 alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.61 44.0 2.54e-01 76.3% 8.8%
3672413 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 53.0 4.66e-01 100.0% 71.1%
3767789 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.61 43.0 3.33e-01 76.3% 85.5%
3964334 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.61 51.0 4.72e-01 93.2% 82.7%
3386015 5086.1.1.223 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PF28155 0.61 50.0 4.77e-01 100.0% 78.7%
3164240 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.60 50.0 4.78e-01 93.2% 91.4%
5052435 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.60 49.0 3.41e-01 100.0% 24.9%
3624104 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 52.0 4.87e-01 98.3% 87.7%
3515049 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.59 44.0 3.40e-01 81.4% 89.3%
4026519 3871.1.1.1 alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN 0.59 51.0 3.98e-01 100.0% 56.3%
3719561 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.59 50.0 3.27e-01 98.3% 21.8%
3627409 6166.1.1.1 alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 0.59 51.0 3.56e-01 100.0% 68.5%
3724623 109.4.1.356 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.59 49.0 2.94e-01 100.0% 12.3%
3227729 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.58 43.0 3.65e-01 81.4% 91.4%
3499265 3542.1.1.3 alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B 0.58 50.0 3.15e-01 100.0% 74.0%
3423775 601.16.1.8 alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › DUF1218 0.58 50.0 3.69e-01 98.3% 49.0%
5065027 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.58 47.0 3.64e-01 94.9% 66.2%
3490375 309.1.1.8 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M 0.58 50.0 3.34e-01 98.3% 56.2%
3497934 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.58 49.0 3.29e-01 100.0% 54.4%
4011414 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.57 49.0 3.39e-01 100.0% 67.9%
4028746 10.28.1.1 beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 0.57 51.0 3.74e-01 100.0% 60.0%
3960610 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 45.0 3.10e-01 88.1% 50.7%
3785111 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 49.0 4.18e-01 98.3% 61.0%
3244833 3914.1.1.2 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin,Anoct_dimer 0.57 47.0 2.67e-01 100.0% 8.0%
4650116 3939.1.1.312 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › DASH_Spc34 0.56 38.0 3.05e-01 81.4% 34.2%
3711672 309.1.1.8 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M 0.56 48.0 3.29e-01 98.3% 60.9%
3838454 327.10.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related 0.56 39.0 3.50e-01 93.2% 53.8%
5042455 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.56 49.0 3.91e-01 100.0% 93.3%
4978893 3755.3.1.632 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Prefoldin 0.55 47.0 3.65e-01 100.0% 73.6%
3946654 517.2.1.0 beta barrels › CBF-like › TraF › TraF 0.55 46.0 3.09e-01 100.0% 21.8%
4067342 5069.1.1.15 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm 0.55 47.0 2.94e-01 100.0% 41.5%
5077595 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 46.0 3.80e-01 94.9% 86.4%
4029803 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.55 46.0 3.69e-01 100.0% 67.7%
5077402 2007.15.1.0 a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase 0.55 39.0 2.75e-01 76.3% 28.6%
3795771 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.55 47.0 2.88e-01 96.6% 15.3%
5049161 177.1.1.0 alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease 0.54 42.0 2.88e-01 84.7% 25.7%
3933404 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.54 47.0 3.52e-01 100.0% 53.3%
1297491 2007.6.1.3 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI 0.54 47.0 2.92e-01 100.0% 48.8%
3233305 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.53 42.0 3.94e-01 89.8% 86.7%
4485921 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 46.0 3.69e-01 100.0% 68.3%
4934732 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 46.0 3.67e-01 100.0% 73.3%
4025375 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.53 41.0 3.40e-01 100.0% 46.1%
4957408 1036.1.1.1 a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 0.52 45.0 3.78e-01 98.3% 83.8%
5043879 304.19.1.1 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.52 46.0 4.01e-01 100.0% 76.7%
3790375 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.51 45.0 3.58e-01 100.0% 51.2%
3514595 327.11.2.3 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 0.51 39.0 3.67e-01 89.8% 68.0%
3934420 5001.1.1.44 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv 0.51 43.0 3.01e-01 100.0% 28.6%
3630462 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 44.0 3.37e-01 100.0% 62.9%
4939519 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.51 44.0 3.59e-01 98.3% 87.3%
5051463 304.54.1.0 a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like 0.50 39.0 3.64e-01 91.5% 66.3%
3727720 216.1.1.1 a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con 0.50 40.0 2.92e-01 86.4% 61.2%
3718200 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.50 44.0 3.49e-01 100.0% 51.2%