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HM144387.1__ADH03263.1__X__00119

Bact-Vir

HM144387.1__ADH03263.1__X__00119

Identity

Accession:
HM144387 ↗
Kingdom:
phage

Quality

87.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-98
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.71 53.0 5.79e-01 100.0% 100.0%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.70 48.0 5.17e-01 90.6% 85.7%
3bxoA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 51.0 4.00e-01 92.9% 36.7%
2fphX01 3.30.1370.160 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.68 50.0 5.26e-01 100.0% 87.0%
3evzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 51.0 4.13e-01 94.1% 42.2%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.67 49.0 4.81e-01 95.3% 71.3%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.66 52.0 5.24e-01 100.0% 83.9%
7dg2C01 1.10.10.1200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif 0.66 52.0 5.47e-01 100.0% 98.7%
4lecA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 47.0 3.58e-01 94.1% 31.7%
1xb4B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 5.59e-01 92.9% 100.0%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.65 46.0 4.90e-01 94.1% 87.7%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.64 46.0 4.22e-01 97.6% 57.7%
3efaA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 45.0 3.78e-01 92.9% 43.2%
2nraC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 54.0 5.17e-01 97.6% 94.1%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 46.0 3.74e-01 91.8% 40.5%
1p0zA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.63 43.0 3.75e-01 71.8% 88.5%
2pjdA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 44.0 3.65e-01 92.9% 40.4%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 45.0 4.07e-01 92.9% 55.8%
4petA01 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.61 43.0 3.27e-01 75.3% 75.3%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 4.52e-01 88.2% 84.4%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 4.02e-01 88.2% 62.1%
2hzlB01 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.59 43.0 3.29e-01 78.8% 74.8%
2fl4A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 42.0 4.00e-01 92.9% 63.5%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.58 47.0 4.75e-01 97.6% 90.6%
3cxjA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.58 42.0 3.58e-01 76.5% 52.8%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 4.72e-01 100.0% 100.0%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.92e-01 97.6% 60.0%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.57 45.0 4.67e-01 97.6% 95.0%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.57 34.0 3.65e-01 75.3% 72.1%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.00e-01 92.9% 65.7%
2fsrA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 41.0 3.39e-01 94.1% 39.8%
2b3tA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 48.0 3.76e-01 97.6% 45.3%
2ctkA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.55 37.0 3.50e-01 74.1% 56.7%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 4.05e-01 92.9% 70.9%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 3.84e-01 96.5% 62.5%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.54 45.0 4.01e-01 91.8% 85.6%
2g47A03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.54 37.0 2.80e-01 71.8% 74.0%
3v8hC00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.54 45.0 3.18e-01 92.9% 68.8%
2p92A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.54 36.0 3.48e-01 77.6% 60.0%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 4.17e-01 97.6% 81.1%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 4.26e-01 100.0% 78.6%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 4.06e-01 100.0% 73.8%
5tvfD00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.53 41.0 2.97e-01 91.8% 27.0%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.53 38.0 3.49e-01 77.6% 81.4%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.85e-01 92.9% 66.1%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.53 43.0 4.17e-01 91.8% 81.1%
2qy6A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 45.0 3.34e-01 97.6% 57.0%
1nv8A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 45.0 3.48e-01 97.6% 48.2%
4r9iA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.52 43.0 3.13e-01 97.6% 95.7%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 3.78e-01 92.9% 64.2%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.83e-01 91.8% 78.0%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 40.0 3.58e-01 90.6% 60.5%
1jrmA00 3.30.1200.10 Alpha Beta › 2-Layer Sandwich › Conserved Hypothetical Protein Mth637; Chain: A; › YggU-like 0.50 38.0 3.63e-01 82.4% 79.8%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.50 44.0 3.46e-01 100.0% 47.9%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3743748 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 50.0 4.93e-01 91.8% 68.9%
3427796 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.71 52.0 5.16e-01 97.6% 74.4%
4017553 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.70 51.0 4.97e-01 97.6% 69.5%
3632622 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.67 52.0 4.81e-01 97.6% 64.5%
4027635 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.66 49.0 5.19e-01 96.5% 92.0%
4606139 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 55.0 5.67e-01 100.0% 97.5%
5620 320.3.1.1 a+b two layers › R3H domain-like › PG1857-like › PG1857-like › DUF2023 0.64 46.0 4.22e-01 97.6% 57.7%
5009548 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.64 49.0 5.00e-01 97.6% 87.5%
4956404 306.6.1.0 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like 0.64 48.0 4.62e-01 91.8% 70.5%
5049103 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 49.0 5.19e-01 97.6% 97.3%
3217591 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 52.0 5.02e-01 97.6% 82.1%
4947948 101.1.2.876 alpha arrays › HTH › HTH › winged helix domain › tRNA-synt_2d 0.62 46.0 4.60e-01 89.4% 78.8%
415845 101.1.2.214 alpha arrays › HTH › HTH › winged helix domain › DnaD_N 0.62 45.0 4.01e-01 91.8% 53.7%
3632795 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.61 54.0 4.98e-01 97.6% 79.1%
3964741 101.1.2.368 alpha arrays › HTH › HTH › winged helix domain › HTH_36 0.61 45.0 4.35e-01 91.8% 68.0%
5073878 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 44.0 4.77e-01 89.4% 94.3%
3605723 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 50.0 5.13e-01 95.3% 95.0%
5067344 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 44.0 4.26e-01 90.6% 67.0%
4011800 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 47.0 3.92e-01 90.6% 46.3%
5056655 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 4.38e-01 90.6% 80.0%
4955182 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.60 42.0 4.06e-01 89.4% 64.0%
4999898 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.59 43.0 4.31e-01 90.6% 73.3%
3275982 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.59 51.0 3.86e-01 96.5% 46.3%
4967969 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.58 41.0 3.39e-01 88.2% 39.4%
3228509 101.1.4.12 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC 0.58 49.0 4.27e-01 96.5% 62.2%
3455348 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.57 41.0 3.92e-01 96.5% 64.0%
4251798 2003.1.5.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.57 49.0 3.73e-01 97.6% 40.5%
5027566 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 43.0 4.33e-01 100.0% 80.0%
3386250 2003.1.5.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.57 49.0 3.78e-01 97.6% 41.0%
4139696 2003.1.5.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.57 48.0 3.63e-01 94.1% 40.9%
3990493 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 49.0 4.84e-01 100.0% 91.1%
3365830 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.57 46.0 3.56e-01 87.1% 66.5%
4948149 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 41.0 3.80e-01 89.4% 59.1%
5059461 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.57 41.0 3.66e-01 92.9% 52.0%
4964147 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.57 42.0 4.06e-01 89.4% 70.5%
5031648 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.57 41.0 3.43e-01 89.4% 40.6%
5011620 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 40.0 3.98e-01 88.2% 71.1%
3602589 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.57 40.0 3.85e-01 89.4% 64.0%
3405387 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 34.0 3.93e-01 87.1% 92.7%
3956202 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.56 42.0 3.00e-01 82.4% 40.4%
4446896 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.56 50.0 3.57e-01 100.0% 92.4%
3178012 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.56 39.0 3.72e-01 90.6% 60.0%
3609468 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 42.0 4.24e-01 89.4% 82.4%
5050784 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 43.0 4.31e-01 97.6% 80.0%
3784212 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 47.0 4.41e-01 97.6% 76.2%
3285125 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.55 46.0 3.47e-01 91.8% 38.1%
3473498 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 4.37e-01 97.6% 85.9%
3838126 2003.1.5.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.55 47.0 3.66e-01 97.6% 42.1%
3588792 2003.1.5.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.55 47.0 3.62e-01 97.6% 43.6%
3586609 101.1.2.278 alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.55 45.0 4.11e-01 96.5% 67.2%
4498408 101.1.2.171 alpha arrays › HTH › HTH › winged helix domain › HTH_52 0.55 39.0 4.36e-01 90.6% 98.5%
4990439 304.116.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor 0.55 37.0 3.57e-01 70.6% 70.0%
3802667 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.55 43.0 4.09e-01 90.6% 72.4%
3714221 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 42.0 4.34e-01 96.5% 91.3%
154263 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.55 43.0 4.05e-01 92.9% 70.9%
2494143 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.54 43.0 3.97e-01 95.3% 67.6%
5062261 101.1.2.892 alpha arrays › HTH › HTH › winged helix domain › ArsR 0.54 39.0 3.72e-01 90.6% 65.0%
3719487 2484.1.1.2 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.54 45.0 3.23e-01 95.3% 50.0%
3782190 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.54 47.0 4.33e-01 100.0% 86.0%
None 0.54 46.0 3.52e-01 97.6% 42.8%
3360854 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.53 45.0 4.07e-01 100.0% 67.5%
4993554 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.60e-01 96.5% 52.1%
1146572 304.152.1.1 a+b two layers › Alpha-beta plaits › E4-ORF3 › E4-ORF3 › Adeno_E4_ORF3 0.53 38.0 3.51e-01 77.6% 82.8%
3503756 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 40.0 4.30e-01 81.2% 98.6%
5064968 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 42.0 3.67e-01 88.2% 66.9%
4651438 2003.1.5.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.52 45.0 3.46e-01 98.8% 42.9%
4928657 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 3.98e-01 97.6% 71.8%
4943632 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 37.0 3.37e-01 89.4% 54.2%