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HM144387.1__ADH03368.1__X__00234

Bact-Vir

HM144387.1__ADH03368.1__X__00234

Identity

Accession:
HM144387 ↗
Kingdom:
phage

Quality

89.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 48-128
PDB
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.77 55.0 6.07e-01 75.3% 96.8%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.77 67.0 5.64e-01 97.5% 67.1%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.70 59.0 4.92e-01 95.1% 78.1%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.67 47.0 3.51e-01 72.8% 42.4%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.64 50.0 4.12e-01 82.7% 69.5%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.62 53.0 4.47e-01 95.1% 67.6%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 52.0 3.89e-01 95.1% 69.8%
6j4nC01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.60 43.0 2.81e-01 75.3% 37.2%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.60 47.0 3.62e-01 85.2% 68.7%
1vprA03 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 47.0 3.77e-01 85.2% 47.1%
1r9fA01 3.30.390.180 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 0.58 38.0 3.46e-01 87.7% 48.6%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 43.0 3.58e-01 81.5% 83.1%
3qktD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 48.0 3.29e-01 95.1% 50.9%
1u14A00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.57 43.0 3.50e-01 82.7% 91.7%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 43.0 3.59e-01 81.5% 88.6%
1srqA01 3.30.1120.160 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.57 39.0 3.33e-01 71.6% 49.3%
1k38A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.57 40.0 2.85e-01 72.8% 56.9%
3qf7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 47.0 3.27e-01 93.8% 79.6%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 43.0 3.48e-01 82.7% 76.8%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 44.0 3.02e-01 85.2% 83.5%
1qw2A00 3.30.1980.10 Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC 0.56 38.0 3.54e-01 70.4% 65.7%
4g2sA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.55 45.0 4.16e-01 90.1% 85.8%
4dm5A00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.55 37.0 3.62e-01 76.5% 63.2%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.54 47.0 3.93e-01 96.3% 61.4%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 45.0 2.88e-01 97.5% 36.7%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 43.0 3.59e-01 92.6% 84.7%
3hi2B00 3.30.2310.40 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › 0.53 37.0 3.46e-01 71.6% 100.0%
1pzdA01 2.60.40.1480 Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain 0.53 37.0 3.00e-01 71.6% 77.6%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.53 45.0 3.69e-01 93.8% 81.3%
1z24A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 47.0 3.60e-01 98.8% 68.8%
2ddmB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.53 46.0 3.26e-01 100.0% 65.3%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 45.0 3.72e-01 98.8% 84.1%
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 39.0 3.35e-01 81.5% 60.9%
3ktnA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.52 46.0 3.06e-01 100.0% 94.1%
7rd0A02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 36.0 2.55e-01 75.3% 82.9%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 42.0 3.67e-01 93.8% 91.0%
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 35.0 3.70e-01 84.0% 78.9%
2z6oA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.51 43.0 3.51e-01 98.8% 81.9%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 38.0 3.14e-01 81.5% 86.3%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.50 42.0 3.51e-01 96.3% 63.8%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3589823 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.87 64.0 7.08e-01 76.5% 96.9%
3483806 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.85 75.0 6.00e-01 95.1% 70.7%
5017154 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.84 75.0 6.26e-01 96.3% 71.9%
3672898 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.82 73.0 6.29e-01 97.5% 65.6%
3603731 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.82 73.0 6.02e-01 97.5% 70.0%
3905746 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.79 56.0 6.00e-01 76.5% 85.7%
3241305 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.79 70.0 5.82e-01 97.5% 69.3%
3427749 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.79 55.0 6.07e-01 75.3% 90.8%
3364063 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.78 69.0 5.71e-01 97.5% 62.9%
3483808 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.76 55.0 5.82e-01 76.5% 87.1%
3920675 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.76 55.0 5.71e-01 77.8% 82.7%
3938164 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.74 53.0 5.73e-01 75.3% 100.0%
3288114 295.1.1.14 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF5984 0.73 63.0 4.48e-01 97.5% 49.6%
3482073 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.72 51.0 5.70e-01 75.3% 100.0%
3985617 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.69 50.0 5.32e-01 90.1% 88.6%
3544618 4292.2.1.0 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.69 55.0 5.40e-01 84.0% 88.2%
5037531 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.67 51.0 2.99e-01 79.0% 21.7%
3936609 5.1.3.176 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › APEH_N 0.67 49.0 3.09e-01 77.8% 45.2%
3241959 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.67 43.0 3.85e-01 72.8% 47.0%
3212364 5.1.5.27 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › APEH_N 0.66 49.0 3.07e-01 79.0% 43.1%
3978756 3197.1.1.1 a+b two layers › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › PipB2_N 0.66 56.0 5.02e-01 97.5% 66.7%
3709162 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 48.0 3.18e-01 77.8% 33.6%
3924601 5.1.5.18 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N 0.65 48.0 3.22e-01 79.0% 38.8%
4969674 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 48.0 3.18e-01 80.2% 36.2%
5071733 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.63 44.0 4.25e-01 71.6% 70.0%
3611079 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.63 54.0 3.90e-01 95.1% 60.4%
4069753 295.1.1.2 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA 0.63 54.0 4.60e-01 96.3% 67.4%
3725129 241.1.1.2 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C 0.63 47.0 3.77e-01 79.0% 68.4%
5009392 5.1.3.127 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Tricorn_N 0.63 44.0 3.11e-01 74.1% 48.9%
3170831 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 43.0 3.54e-01 72.8% 75.2%
3485288 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.62 53.0 3.99e-01 93.8% 78.0%
3822596 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.62 47.0 3.12e-01 80.2% 46.0%
4882253 5.1.4.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin_propel 0.62 46.0 3.08e-01 79.0% 42.0%
None 0.62 46.0 3.03e-01 79.0% 38.9%
4120420 295.1.1.15 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0128 0.62 42.0 3.80e-01 70.4% 94.8%
4317534 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 45.0 3.24e-01 79.0% 46.8%
3394711 4026.1.1.1 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.61 42.0 3.36e-01 70.4% 41.2%
5034929 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.61 43.0 3.12e-01 72.8% 56.1%
3449246 5.1.3.54 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.61 42.0 3.16e-01 72.8% 79.8%
3711120 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 48.0 4.08e-01 88.9% 87.9%
3840117 207.2.1.83 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › VacA2 0.60 44.0 2.54e-01 79.0% 12.0%
3893043 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.59 50.0 3.80e-01 92.6% 69.2%
4348096 3675.1.1.1 a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert 0.58 48.0 3.91e-01 93.8% 70.3%
4578621 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.58 50.0 3.73e-01 97.5% 70.0%
4160593 3675.1.1.1 a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert 0.58 48.0 3.95e-01 96.3% 79.4%
3262392 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 47.0 3.20e-01 88.9% 64.9%
3970718 3675.1.1.0 a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain 0.58 48.0 4.06e-01 96.3% 88.7%
4429847 3675.1.1.1 a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert 0.58 48.0 3.94e-01 96.3% 80.6%
3580035 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 42.0 2.83e-01 80.2% 31.1%
4025950 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.57 38.0 2.83e-01 97.5% 27.1%
None 0.57 46.0 3.05e-01 87.7% 92.4%
3481354 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 46.0 3.05e-01 87.7% 92.7%
3336515 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.56 42.0 2.86e-01 80.2% 43.5%
5047148 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.56 47.0 3.19e-01 95.1% 83.0%
3536447 4026.1.1.1 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.56 40.0 3.33e-01 75.3% 47.6%
3164017 9.11.1.0 beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.56 40.0 3.87e-01 74.1% 88.9%
3709343 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.56 39.0 3.32e-01 74.1% 44.6%
3923721 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 46.0 3.07e-01 93.8% 52.8%
2391407 12.3.1.35 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GalA_N 0.54 37.0 2.89e-01 71.6% 82.9%
3831586 5.1.4.116 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 0.53 39.0 2.95e-01 79.0% 58.6%
151649 5.1.4.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin_propel 0.53 44.0 3.00e-01 93.8% 54.3%
4354872 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 44.0 3.11e-01 93.8% 74.8%
3938904 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.52 43.0 3.76e-01 95.1% 86.7%
4363296 330.11.1.1 a+b two layers › dsRBD-like › Anti-lipopolysaccharide factor (ALF) › Anti-lipopolysaccharide factor (ALF) › Anti-LPS-SCYG 0.52 45.0 4.21e-01 96.3% 88.0%
3965735 274.1.1.5 a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.52 38.0 3.75e-01 77.8% 80.0%
4122231 216.1.1.6 a+b two layers › UBC-like › UBC-like › UBC-like › UFC1 0.52 40.0 3.33e-01 88.9% 84.2%
3520852 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.51 43.0 3.63e-01 98.8% 88.0%