←Back to structures

HM150760.1__AED02387.1__X__00005

Bact-Vir

HM150760.1__AED02387.1__X__00005

Identity

Accession:
HM150760 ↗
Kingdom:
phage

Quality

65.4 mean pLDDT

Taxonomy

Loebvirae› Hofneiviricota› Faserviricetes› Tubulavirales› Inoviridae› Siphunculivirus› Stenotrophomonas_phage_phiSHP2

TaxID: 1027253

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-109
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cygA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.62 46.0 4.26e-01 84.8% 61.3%
3zi1A02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.62 37.0 3.24e-01 80.4% 37.9%
3rriA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.61 37.0 3.29e-01 91.3% 42.0%
1auwA02 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.60 44.0 3.28e-01 77.2% 80.7%
4r3aA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.59 46.0 4.00e-01 83.7% 71.8%
1g5hA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.59 50.0 3.50e-01 93.5% 32.9%
5xoyB02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 46.0 4.42e-01 85.9% 85.0%
5eo6B00 3.40.1500.10 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic 0.56 45.0 3.11e-01 87.0% 39.7%
1vluA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.55 44.0 3.25e-01 87.0% 86.5%
6uioC01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 41.0 4.04e-01 82.6% 100.0%
1tj7A02 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.54 45.0 3.20e-01 91.3% 60.9%
1sb7A02 3.30.2340.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › TruD, insertion domain 0.54 47.0 4.22e-01 100.0% 91.9%
3lh4A00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 42.0 3.96e-01 85.9% 92.2%
4n6tA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 37.0 3.91e-01 73.9% 96.2%
2ch9A01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 40.0 3.78e-01 83.7% 93.8%
3qnkC00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 39.0 2.46e-01 80.4% 35.0%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4950462 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 38.0 4.41e-01 83.7% 93.3%
3576101 304.112.1.0 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.62 47.0 4.01e-01 80.4% 97.3%
5050697 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.62 35.0 4.34e-01 73.9% 100.0%
5055392 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.62 47.0 4.11e-01 81.5% 81.4%
1714216 225.1.1.3 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.59 46.0 3.94e-01 84.8% 64.9%
3917054 241.15.1.3 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.57 48.0 4.39e-01 92.4% 88.8%
4985869 283.2.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.57 43.0 4.40e-01 92.4% 83.1%
3928469 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 44.0 4.24e-01 83.7% 90.5%
3220280 243.3.1.1 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.56 43.0 4.11e-01 82.6% 98.2%
3432530 7579.1.1.42 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 0.56 45.0 3.08e-01 87.0% 30.4%
3520314 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.56 41.0 3.85e-01 76.1% 89.1%
3926892 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 45.0 3.14e-01 87.0% 49.3%
4980680 225.1.1.0 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.55 50.0 4.00e-01 100.0% 84.4%
3824277 243.3.1.1 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.55 44.0 3.94e-01 87.0% 76.0%
3948020 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.54 44.0 4.14e-01 93.5% 73.6%
3920627 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.53 43.0 2.70e-01 87.0% 99.2%
4262043 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 38.0 4.06e-01 78.3% 93.8%
3783216 70.3.1.1 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.52 37.0 2.64e-01 75.0% 81.0%
4315975 243.3.1.68 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY, FTP 0.51 39.0 3.28e-01 82.6% 71.5%
5045708 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 37.0 4.00e-01 78.3% 100.0%
3808505 243.3.1.1 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.51 38.0 3.97e-01 80.4% 100.0%
3297423 2484.1.1.198 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 0.51 44.0 2.75e-01 100.0% 71.6%
3441142 4.8.1.7 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SAWADEE 0.51 27.0 3.28e-01 92.4% 83.6%
3649875 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 41.0 2.93e-01 89.1% 93.3%
3658474 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 38.0 3.79e-01 78.3% 85.3%
3335943 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 41.0 2.61e-01 90.2% 54.8%
5082785 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.50 37.0 3.92e-01 83.7% 92.5%
D2 medium residues 120-160
PDB
Domain cluster: representative
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gyiA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 49.0 3.79e-01 85.4% 91.8%
2zylA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.64 52.0 3.70e-01 95.1% 32.6%
2q0iA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.63 52.0 3.18e-01 97.6% 44.7%
1qh5A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.63 52.0 3.27e-01 100.0% 28.1%
2wylC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.62 50.0 3.05e-01 97.6% 39.9%
4xpmB00 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.62 49.0 4.40e-01 100.0% 89.6%
7szeB01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.62 51.0 3.82e-01 95.1% 44.9%
7plsA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 44.0 3.45e-01 78.0% 88.2%
1vmeB01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.61 50.0 3.10e-01 95.1% 43.4%
1xg9A02 3.10.25.20 Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › 0.61 47.0 4.27e-01 92.7% 79.0%
7ct3A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.60 48.0 3.67e-01 100.0% 65.0%
3gkeA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.60 48.0 3.51e-01 95.1% 33.1%
1y7bA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 43.0 2.58e-01 80.5% 74.5%
3c8cB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.60 51.0 3.68e-01 97.6% 52.8%
4paaA03 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.59 44.0 3.02e-01 95.1% 29.6%
1skoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.59 48.0 3.59e-01 100.0% 44.8%
2dmwA01 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.59 46.0 3.51e-01 100.0% 34.5%
1r8oB01 2.30.30.480 Mainly Beta › Roll › SH3 type barrels. › 0.58 46.0 4.02e-01 92.7% 87.9%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.58 46.0 3.52e-01 100.0% 45.4%
2pi2D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 42.0 3.29e-01 95.1% 72.4%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 40.0 3.21e-01 80.5% 79.4%
5flwA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 41.0 2.49e-01 80.5% 76.5%
5jozA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 41.0 2.51e-01 80.5% 93.8%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 40.0 3.25e-01 80.5% 87.0%
2g5dA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.57 43.0 2.86e-01 90.2% 42.8%
4o8uA00 3.30.420.440 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF4152 0.56 39.0 2.52e-01 80.5% 13.2%
1u04A04 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 46.0 2.96e-01 100.0% 23.2%
1vqwA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 41.0 2.47e-01 82.9% 47.2%
1pfoA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.56 42.0 3.93e-01 85.4% 83.0%
3hi0A02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.56 44.0 3.03e-01 100.0% 24.0%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 41.0 3.69e-01 87.8% 71.2%
3azwA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 41.0 2.68e-01 90.2% 15.7%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.56 40.0 2.71e-01 80.5% 18.5%
2kheA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.55 45.0 3.68e-01 100.0% 89.9%
4bv4R00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.55 41.0 2.38e-01 87.8% 7.7%
3p2mA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 39.0 2.46e-01 82.9% 21.0%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 38.0 3.70e-01 80.5% 63.3%
3jbtA05 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 44.0 2.64e-01 97.6% 17.7%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 2.81e-01 95.1% 22.0%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 43.0 2.83e-01 95.1% 20.5%
4qq1C03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.54 43.0 3.55e-01 100.0% 53.4%
2n54B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 38.0 3.41e-01 85.4% 48.5%
1p9eA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 40.0 2.48e-01 80.5% 21.1%
1j3wC00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.54 42.0 3.14e-01 100.0% 39.8%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 38.0 3.02e-01 80.5% 80.4%
1kutB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 40.0 3.25e-01 87.8% 77.5%
3gjyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 38.0 2.37e-01 87.8% 11.8%
4i0wD02 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.53 43.0 3.14e-01 100.0% 40.8%
6ewnA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 38.0 2.99e-01 82.9% 47.5%
2jfrA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.52 38.0 2.50e-01 82.9% 53.0%
4g7nA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.52 39.0 2.97e-01 90.2% 33.1%
3jcmN01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 37.0 2.37e-01 78.0% 92.2%
2aujD03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 36.0 3.30e-01 80.5% 50.0%
2gx9A00 3.30.420.330 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Influenza virus non-structural protein, effector domain 0.52 38.0 2.76e-01 80.5% 46.8%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.52 38.0 2.71e-01 80.5% 23.6%
3g8yA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 38.0 2.26e-01 82.9% 25.1%
1ilyA00 3.30.420.100 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.51 37.0 3.02e-01 82.9% 44.4%
1fo0B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 39.0 3.11e-01 100.0% 54.5%
5x6vF00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 40.0 3.07e-01 100.0% 62.7%
1jyaB00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.51 42.0 3.13e-01 97.6% 36.4%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 38.0 2.95e-01 87.8% 78.2%
1jnrB02 6.20.260.10 Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain 0.51 35.0 2.96e-01 82.9% 38.6%
1tqzA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 39.0 3.01e-01 100.0% 73.2%
2xu8A00 3.90.70.190 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Domain of unknown function (DUF5086) 0.51 40.0 3.05e-01 97.6% 37.1%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 36.0 2.73e-01 80.5% 30.8%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2728118 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.70 49.0 2.91e-01 80.5% 9.6%
5008689 247.1.1.28 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL 0.68 57.0 3.71e-01 97.6% 39.5%
5047563 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 46.0 3.80e-01 75.6% 40.0%
4408024 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.66 46.0 4.14e-01 80.5% 51.7%
3224924 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.65 48.0 3.37e-01 80.5% 74.1%
3276550 4312.2.1.0 ↗ a+b two layers › RelE-like › YaeB-like › YaeB-like 0.64 53.0 4.21e-01 100.0% 94.6%
5045351 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 54.0 4.05e-01 100.0% 58.2%
4495021 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.64 46.0 2.67e-01 82.9% 8.7%
5015845 230.1.1.3 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.63 45.0 3.04e-01 75.6% 92.1%
3883146 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.63 50.0 4.97e-01 95.1% 95.6%
3937472 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.62 50.0 3.81e-01 95.1% 39.0%
3742847 223.2.1.23 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › NPR3 0.62 49.0 3.31e-01 100.0% 44.2%
4514585 207.6.1.13 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind+RTX_C 0.61 43.0 2.59e-01 80.5% 10.0%
4928701 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 49.0 3.84e-01 100.0% 76.2%
3539250 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.60 48.0 3.72e-01 95.1% 42.9%
3227025 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.60 42.0 3.88e-01 82.9% 53.3%
3620870 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 49.0 3.85e-01 100.0% 48.0%
1117625 5.1.4.37 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.60 44.0 2.52e-01 80.5% 87.8%
3930154 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 48.0 3.35e-01 100.0% 49.1%
4988969 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.60 42.0 3.53e-01 75.6% 94.9%
4928263 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 47.0 3.70e-01 100.0% 71.8%
3466771 375.3.1.2 ↗ few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger › zf-CSL 0.60 40.0 3.76e-01 75.6% 52.7%
4263140 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.60 42.0 3.65e-01 80.5% 45.7%
4945423 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 49.0 3.76e-01 100.0% 65.7%
4978622 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 47.0 3.76e-01 100.0% 62.0%
4154416 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.59 40.0 2.71e-01 87.8% 16.6%
5056317 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.59 48.0 3.00e-01 97.6% 43.6%
3252084 3459.1.1.0 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.59 47.0 3.93e-01 95.1% 86.3%
4938531 247.1.1.30 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 0.59 48.0 3.33e-01 100.0% 74.2%
3321360 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.58 43.0 3.63e-01 82.9% 49.3%
4995755 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 43.0 4.20e-01 82.9% 73.3%
4200272 218.1.1.0 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.58 40.0 3.22e-01 80.5% 33.3%
3971431 241.11.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like 0.58 44.0 3.60e-01 87.8% 42.9%
4068562 247.1.1.29 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Anti-Pycsar_Apyc1 0.58 46.0 2.87e-01 100.0% 39.7%
5053495 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 47.0 3.25e-01 100.0% 26.9%
3924241 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 46.0 2.54e-01 97.6% 45.0%
3476370 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 44.0 3.19e-01 100.0% 26.9%
4991121 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 46.0 3.52e-01 100.0% 44.3%
4025219 874.1.1.0 ↗ a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain 0.57 46.0 3.04e-01 100.0% 26.3%
3585186 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.57 41.0 4.33e-01 92.7% 94.3%
4944053 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 41.0 3.47e-01 78.0% 44.0%
3907054 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.57 40.0 3.19e-01 80.5% 82.0%
4927204 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 45.0 3.69e-01 100.0% 55.6%
5071984 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 44.0 3.24e-01 100.0% 51.4%
4940748 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.56 45.0 3.75e-01 100.0% 56.6%
4432262 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.56 40.0 3.01e-01 80.5% 64.2%
3302402 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.56 39.0 3.12e-01 80.5% 80.0%
3897327 2.1.1.241 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rsm22 0.55 40.0 3.73e-01 80.5% 98.2%
3584223 5.1.5.64 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DCAF17 0.55 45.0 2.60e-01 100.0% 12.5%
1870610 2484.7.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Uncharacterized protein PF2046 › Uncharacterized protein PF2046 › DUF4152 0.55 39.0 2.46e-01 80.5% 13.0%
5064976 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 40.0 2.79e-01 82.9% 21.3%
5044391 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 38.0 3.71e-01 80.5% 62.0%
4945229 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 43.0 3.31e-01 100.0% 44.2%
3286654 223.1.1.37 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Rv3651-like_N 0.55 42.0 3.44e-01 100.0% 91.0%
5027803 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.55 44.0 3.72e-01 100.0% 60.0%
1570612 10.1.1.25 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N 0.55 43.0 2.82e-01 95.1% 20.3%
3850090 4099.1.1.19 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_RM8 0.55 42.0 3.04e-01 92.7% 38.4%
4940035 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 43.0 3.34e-01 100.0% 39.1%
3754695 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.54 39.0 2.91e-01 80.5% 62.4%
4027383 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.54 40.0 2.37e-01 82.9% 9.2%
3413099 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.54 37.0 3.02e-01 80.5% 80.0%
4001239 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 42.0 3.39e-01 97.6% 83.2%
3644584 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.53 39.0 2.82e-01 82.9% 57.9%
2388260 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 44.0 3.03e-01 100.0% 31.7%
4443818 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.53 40.0 2.40e-01 100.0% 27.4%
4413356 223.1.1.18 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_4 0.53 42.0 2.86e-01 100.0% 39.5%
4959351 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.53 39.0 3.47e-01 100.0% 51.2%
1148074 3400.1.1.1 ↗ a+b complex topology › Membrane-associated protein VP24 › Membrane-associated protein VP24 › Membrane-associated protein VP24 › Filo_VP24 0.52 42.0 2.74e-01 100.0% 62.2%
4497740 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.51 36.0 3.33e-01 80.5% 53.3%
3214386 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.51 37.0 3.64e-01 92.7% 92.0%
3969569 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 35.0 3.26e-01 80.5% 53.3%
3490944 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.51 38.0 2.83e-01 95.1% 62.8%
3405285 394.1.1.0 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins 0.50 36.0 3.21e-01 92.7% 48.8%
3985171 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.50 36.0 2.61e-01 80.5% 22.9%
5017861 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.50 37.0 2.20e-01 82.9% 15.0%
D3 medium residues 290-324
PDB
Domain cluster: representative