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HM159959.1__ADL40319.1__phiCTP1_gp18__00018

Bact-Vir

HM159959.1__ADL40319.1__phiCTP1_gp18__00018

Identity

Accession:
HM159959 ↗
Kingdom:
phage

Quality

82.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clostridium_phage_phiCTP1

TaxID: 871584

Cluster

View cluster (32 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-42_64-178
PDB
Domain cluster: rep: SRR1747021_scaffold_144_prodigal-single.1__X__X__00059__D46-135_173-256
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.71 39.0 5.15e-01 87.2% 100.0%
3he1A00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.69 60.0 6.06e-01 100.0% 92.5%
4hkhA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.68 60.0 6.04e-01 99.3% 93.3%
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.68 46.0 4.66e-01 100.0% 69.4%
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.67 43.0 5.21e-01 85.2% 100.0%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.67 31.0 3.98e-01 79.9% 74.2%
4w64B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.65 57.0 5.58e-01 98.7% 86.9%
3onrJ00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.65 30.0 4.25e-01 73.8% 94.1%
1y12B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.64 58.0 5.72e-01 99.3% 91.7%
3eaaA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.62 58.0 5.67e-01 100.0% 91.4%
2fbjH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 31.0 4.17e-01 81.2% 94.5%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 34.0 4.32e-01 83.9% 91.9%
3q0bX00 2.30.280.10 Mainly Beta › Roll › PUA domain-like › SRA-YDG 0.61 47.0 4.72e-01 95.3% 79.7%
6grsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 31.0 3.80e-01 82.6% 75.8%
4r6uA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 32.0 3.78e-01 84.6% 72.8%
1lp9E02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 30.0 3.89e-01 83.2% 86.3%
3luyA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 29.0 3.59e-01 81.2% 76.4%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.57 38.0 4.11e-01 94.0% 79.2%
7k0xA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 30.0 4.08e-01 81.2% 98.7%
2w59A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 32.0 3.78e-01 83.9% 82.0%
3u83A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 32.0 3.71e-01 83.9% 80.2%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 32.0 4.10e-01 83.9% 97.7%
3d2uA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 33.0 4.01e-01 83.9% 95.7%
3o4oB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 32.0 3.70e-01 84.6% 80.7%
2gysA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 31.0 3.83e-01 97.3% 91.6%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 32.0 3.79e-01 83.2% 95.8%
5wy8B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 32.0 3.56e-01 83.9% 82.1%
2bc4A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 32.0 3.63e-01 85.2% 86.2%
3ct9A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 32.0 3.68e-01 76.5% 87.9%
1cwvA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 31.0 3.73e-01 84.6% 92.2%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5078836 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.79 57.0 6.58e-01 98.0% 100.0%
4954551 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.78 64.0 6.71e-01 100.0% 93.3%
5079559 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.77 58.0 6.50e-01 92.6% 100.0%
3058416 1.1.5.39 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › TssD 0.74 57.0 6.17e-01 98.7% 92.9%
4929634 1.1.5.47 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.74 61.0 4.89e-01 100.0% 47.0%
4957560 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.73 61.0 6.56e-01 98.0% 100.0%
5003885 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.71 61.0 6.27e-01 99.3% 93.8%
3955284 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.70 48.0 4.93e-01 100.0% 72.9%
5040332 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.70 51.0 5.68e-01 100.0% 95.7%
4009489 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.70 62.0 6.19e-01 100.0% 90.3%
2471637 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.69 64.0 6.40e-01 100.0% 96.6%
3942090 1.1.5.77 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube 0.69 60.0 5.79e-01 100.0% 82.4%
3502370 1.1.5.47 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.68 64.0 6.25e-01 100.0% 94.4%
1124583 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.68 60.0 6.04e-01 99.3% 93.3%
4982153 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.67 59.0 4.74e-01 100.0% 51.1%
3966479 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.67 62.0 5.97e-01 99.3% 94.5%
3581358 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.66 61.0 6.01e-01 98.7% 92.9%
3942477 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.66 61.0 5.96e-01 99.3% 90.2%
2642579 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.66 54.0 5.79e-01 98.7% 99.2%
2832217 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.66 58.0 5.98e-01 100.0% 97.2%
2097771 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.66 61.0 5.87e-01 99.3% 91.8%
1563850 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.65 57.0 5.59e-01 98.7% 86.9%
5056723 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 37.0 4.44e-01 86.6% 87.4%
3265120 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.64 59.0 5.62e-01 99.3% 85.1%
4929752 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.64 58.0 5.75e-01 99.3% 92.9%
3264744 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.63 58.0 5.51e-01 99.3% 85.1%
3977123 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.63 58.0 5.66e-01 99.3% 91.9%
80 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.63 58.0 5.67e-01 99.3% 91.9%
136185 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.62 58.0 5.67e-01 100.0% 91.4%
3969384 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.62 58.0 5.67e-01 99.3% 92.5%
3408311 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 32.0 3.79e-01 83.9% 71.0%
2387782 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.62 57.0 5.51e-01 99.3% 90.5%
3943689 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.60 41.0 4.71e-01 85.9% 93.6%
3944430 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.60 40.0 4.70e-01 85.9% 96.2%
3262933 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 35.0 3.90e-01 85.2% 73.9%
3542615 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.59 31.0 3.80e-01 96.6% 78.9%
3473931 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.57 34.0 3.82e-01 83.9% 76.5%
3749000 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.52 34.0 3.81e-01 83.9% 85.2%
4988150 241.1.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.52 28.0 3.28e-01 99.3% 73.3%
3782892 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.52 30.0 3.23e-01 99.3% 65.6%
4454809 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.52 35.0 3.89e-01 85.2% 85.8%
3921175 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 34.0 4.01e-01 84.6% 99.0%
4379611 304.102.1.6 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.50 38.0 3.33e-01 79.9% 60.9%