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HM159959.1__ADL40356.1__phiCTP1_gp55__00055
Bact-VirHM159959.1__ADL40356.1__phiCTP1_gp55__00055
Identity
- Accession:
- HM159959 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Cluster
View cluster (31 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-56
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.80 | 65.0 | 4.88e-01 | 100.0% | 37.6% |
| 4hc5D00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.70 | 53.0 | 4.04e-01 | 89.3% | 35.1% |
| 3bm3A00 | 3.40.91.80 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.70 | 64.0 | 4.04e-01 | 100.0% | 37.8% |
| 3rheA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.70 | 54.0 | 4.33e-01 | 96.4% | 42.1% |
| 5ntdA02 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.68 | 59.0 | 3.67e-01 | 100.0% | 38.2% |
| 4huzA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.67 | 52.0 | 3.81e-01 | 96.4% | 31.8% |
| 1y88A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.66 | 54.0 | 4.25e-01 | 96.4% | 41.6% |
| 3getA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.64 | 56.0 | 4.70e-01 | 98.2% | 73.4% |
| 4i8oA01 | 3.30.310.240 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain | 0.63 | 54.0 | 4.69e-01 | 100.0% | 66.3% |
| 6p66D01 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.60 | 49.0 | 3.99e-01 | 98.2% | 46.8% |
| 1q7sA00 | 3.40.1490.10 | Alpha Beta › 3-Layer(aba) Sandwich › Bit1 › Bit1 | 0.60 | 52.0 | 4.02e-01 | 94.6% | 48.7% |
| 2g18I00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.59 | 49.0 | 3.30e-01 | 96.4% | 66.4% |
| 1h0hB01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 42.0 | 3.10e-01 | 89.3% | 28.7% |
| 3odhA00 | 3.40.91.20 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.57 | 46.0 | 3.26e-01 | 100.0% | 26.8% |
| 1ekzA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 47.0 | 4.35e-01 | 98.2% | 85.5% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.57 | 41.0 | 3.95e-01 | 78.6% | 100.0% |
| 3g2eB00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.57 | 48.0 | 3.41e-01 | 98.2% | 66.5% |
| 2hfvA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.57 | 49.0 | 4.39e-01 | 94.6% | 83.1% |
| 3evzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 44.0 | 3.18e-01 | 83.9% | 41.6% |
| 2k6vA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 46.0 | 3.42e-01 | 98.2% | 62.8% |
| 2fnuB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 48.0 | 3.75e-01 | 98.2% | 63.6% |
| 2l6mA00 | 3.30.160.400 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 46.0 | 3.93e-01 | 100.0% | 78.2% |
| 1z6hA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.55 | 39.0 | 3.62e-01 | 91.1% | 59.7% |
| 5b3pA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.54 | 44.0 | 3.45e-01 | 94.6% | 47.8% |
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.54 | 44.0 | 3.39e-01 | 98.2% | 60.9% |
| 3syyA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.54 | 45.0 | 3.21e-01 | 100.0% | 28.9% |
| 5kf6B02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.54 | 46.0 | 3.09e-01 | 98.2% | 24.7% |
| 2dn8A01 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 40.0 | 3.72e-01 | 98.2% | 63.9% |
| 3hg9A01 | 3.30.1300.90 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › PilM protein, N-terminal domain | 0.53 | 36.0 | 3.27e-01 | 100.0% | 51.9% |
| 3vkgB03 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.53 | 43.0 | 3.12e-01 | 87.5% | 65.4% |
| 2azeB00 | 6.10.250.540 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.53 | 37.0 | 3.13e-01 | 100.0% | 41.6% |
| 6u26A01 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.53 | 45.0 | 3.89e-01 | 100.0% | 60.2% |
| 1lfwA03 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 44.0 | 3.85e-01 | 98.2% | 70.5% |
| 1lk5A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 42.0 | 3.85e-01 | 94.6% | 81.0% |
| 3cedA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.51 | 36.0 | 3.14e-01 | 78.6% | 73.5% |
| 2vecA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 36.0 | 2.85e-01 | 76.8% | 46.8% |
| 3p04A00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.51 | 37.0 | 3.43e-01 | 82.1% | 80.5% |
| 7ywdB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 40.0 | 3.46e-01 | 94.6% | 54.3% |
| 1gxsB02 | 3.40.50.11320 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 41.0 | 3.56e-01 | 98.2% | 57.1% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4260673 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.78 | 66.0 | 4.93e-01 | 98.2% | 38.1% |
| 5032035 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.78 | 65.0 | 6.02e-01 | 100.0% | 72.9% |
| 1837447 | 2008.1.1.56 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_5 | 0.77 | 65.0 | 4.80e-01 | 100.0% | 37.7% |
| 4972340 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.72 | 54.0 | 5.13e-01 | 92.9% | 69.2% |
| 5057728 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 60.0 | 4.63e-01 | 96.4% | 41.6% |
| 3506045 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 66.0 | 4.46e-01 | 100.0% | 30.3% |
| 3338602 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.72 | 64.0 | 4.39e-01 | 100.0% | 31.9% |
| 5038948 | 2008.1.1.224 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_3 | 0.72 | 65.0 | 5.02e-01 | 100.0% | 47.9% |
| 4957822 | 2008.1.1.224 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_3 | 0.71 | 65.0 | 4.90e-01 | 100.0% | 44.2% |
| 4995692 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 64.0 | 4.82e-01 | 100.0% | 49.2% |
| 3498911 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.70 | 63.0 | 5.19e-01 | 100.0% | 58.2% |
| 5044802 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 59.0 | 4.01e-01 | 100.0% | 26.7% |
| 3813800 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.68 | 57.0 | 4.19e-01 | 94.6% | 36.0% |
| 5040208 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 57.0 | 4.33e-01 | 98.2% | 40.0% |
| 5051988 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 58.0 | 4.44e-01 | 98.2% | 44.2% |
| 145830 | 2.2.1.6 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › SSL_OB | 0.66 | 38.0 | 3.26e-01 | 75.0% | 36.0% |
| 4955851 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 55.0 | 3.74e-01 | 94.6% | 26.5% |
| 3469315 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.65 | 56.0 | 3.35e-01 | 100.0% | 16.4% |
| 3724381 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.64 | 57.0 | 4.19e-01 | 100.0% | 46.2% |
| 5022819 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.64 | 52.0 | 4.19e-01 | 92.9% | 45.2% |
| 4946707 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 50.0 | 3.95e-01 | 87.5% | 42.6% |
| 3966984 | 306.2.2.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › Hypothetical protein SAV1430 | 0.62 | 54.0 | 4.20e-01 | 98.2% | 85.5% |
| 5049500 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 55.0 | 4.02e-01 | 100.0% | 61.3% |
| 3877290 | 101.1.2.699 ↗ | alpha arrays › HTH › HTH › winged helix domain › KCTD_C | 0.61 | 44.0 | 3.49e-01 | 78.6% | 37.4% |
| 5005960 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.61 | 52.0 | 3.61e-01 | 96.4% | 29.9% |
| 3206164 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.60 | 49.0 | 3.32e-01 | 92.9% | 40.4% |
| 3205349 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.60 | 51.0 | 3.01e-01 | 96.4% | 35.9% |
| 3258882 | 309.1.2.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain | 0.60 | 53.0 | 3.78e-01 | 100.0% | 88.5% |
| 4034310 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.59 | 47.0 | 3.36e-01 | 96.4% | 72.2% |
| 3518638 | 101.1.2.132 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF3591 | 0.58 | 39.0 | 3.27e-01 | 98.2% | 41.1% |
| 4993583 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.57 | 46.0 | 3.60e-01 | 87.5% | 78.3% |
| 3290839 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.57 | 42.0 | 4.43e-01 | 83.9% | 96.0% |
| 3774554 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.56 | 45.0 | 4.20e-01 | 96.4% | 80.0% |
| 3444419 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 45.0 | 3.83e-01 | 94.6% | 76.0% |
| 3245196 | 309.1.2.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain | 0.54 | 44.0 | 3.24e-01 | 96.4% | 74.9% |
| 4983802 | 3241.1.1.0 ↗ | alpha arrays › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 | 0.54 | 43.0 | 3.11e-01 | 100.0% | 79.0% |
| 3485400 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 41.0 | 3.38e-01 | 83.9% | 49.5% |
| 3651990 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 40.0 | 4.01e-01 | 82.1% | 81.0% |
| 4011877 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.54 | 43.0 | 3.78e-01 | 96.4% | 73.7% |
| 4975819 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.53 | 40.0 | 2.77e-01 | 85.7% | 38.2% |
| 3385974 | 7541.1.1.0 ↗ | a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins | 0.53 | 44.0 | 3.43e-01 | 96.4% | 42.3% |
| 3482923 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.52 | 43.0 | 3.73e-01 | 98.2% | 84.2% |
| 3580778 | 3409.1.1.3 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › ATG14 | 0.51 | 42.0 | 3.17e-01 | 100.0% | 62.4% |
| 4096170 | 325.1.7.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H | 0.51 | 45.0 | 3.58e-01 | 100.0% | 49.6% |
| 3488222 | 304.120.1.9 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › MBTP1_N | 0.51 | 39.0 | 3.44e-01 | 91.1% | 76.8% |
| 3510946 | 2.1.1.92 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_D_N | 0.51 | 38.0 | 3.23e-01 | 89.3% | 93.0% |
| 3232363 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 2.77e-01 | 87.5% | 37.6% |
| 3781188 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 36.0 | 3.23e-01 | 80.4% | 52.2% |
| 3994277 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 38.0 | 3.39e-01 | 83.9% | 72.9% |
D2
medium
residues 57-156
Domain cluster:
rep: MW824391.1__QZI91413.1__PODOV084v1_p0034__00034__D41-168
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03838.21 best | RecU | 26.3 | 8.90e-06 | 87.0% | 47.5% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rznA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.80 | 70.0 | 6.06e-01 | 95.0% | 62.7% |
| 1ob8A00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.71 | 50.0 | 4.73e-01 | 99.0% | 61.3% |
| 2w8mA00 | 3.40.1350.50 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › D212 PD-(D/E)XK nuclease, catalytic motif | 0.62 | 51.0 | 4.32e-01 | 100.0% | 54.5% |
| 3ocoA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 45.0 | 4.16e-01 | 94.0% | 77.2% |
| 3g7nB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 42.0 | 3.19e-01 | 85.0% | 71.2% |
| 3ga7A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 46.0 | 3.34e-01 | 100.0% | 74.4% |
| 7zr3A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 46.0 | 3.29e-01 | 100.0% | 73.8% |
| 3hrgA01 | 3.30.420.250 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain | 0.51 | 32.0 | 2.86e-01 | 79.0% | 41.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4284406 | 2008.1.1.13 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecU | 0.88 | 77.0 | 6.40e-01 | 95.0% | 57.5% |
| 4489860 | 2008.1.1.13 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecU | 0.85 | 74.0 | 6.12e-01 | 99.0% | 55.8% |
| 4293420 | 2008.1.1.13 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecU | 0.83 | 75.0 | 5.81e-01 | 99.0% | 47.5% |
| 3686792 | 263.1.1.0 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like | 0.54 | 32.0 | 3.84e-01 | 73.0% | 95.0% |
| 3447000 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.52 | 37.0 | 3.84e-01 | 75.0% | 96.8% |
| 3602310 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 45.0 | 4.16e-01 | 100.0% | 75.4% |
| 4950580 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.51 | 40.0 | 3.73e-01 | 89.0% | 83.7% |