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HM242243.1__ADJ53228.1__X__00194
Bact-VirHM242243.1__ADJ53228.1__X__00194
Identity
- Accession:
- HM242243 ↗
- Kingdom:
- phage
Quality
88.7
mean pLDDT
Taxonomy
TaxID: 857312
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-43
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cjnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 44.0 | 3.05e-01 | 78.4% | 30.8% |
| 2af6A01 | 3.30.70.3180 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 45.0 | 3.21e-01 | 86.5% | 95.4% |
| 1n8yC02 | 2.10.220.10 | Mainly Beta › Ribbon › Hormone Receptor, Insulin-like Growth Factor Receptor 1; Chain A domain 2 › Hormone Receptor, Insulin-like Growth Factor Receptor 1; Chain A, domain 2 | 0.61 | 46.0 | 3.36e-01 | 89.2% | 29.4% |
| 2m2dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 43.0 | 3.14e-01 | 81.1% | 65.3% |
| 1vx7000 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.60 | 51.0 | 4.32e-01 | 97.3% | 61.3% |
| 5m99A02 | 3.90.400.10 | Alpha Beta › Alpha-Beta Complex › Oligo-1,6-glucosidase; domain 2 › Oligo-1,6-glucosidase; Domain 2 | 0.59 | 46.0 | 3.94e-01 | 89.2% | 53.8% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 41.0 | 3.26e-01 | 78.4% | 54.3% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 44.0 | 3.75e-01 | 89.2% | 66.2% |
| 5xukA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.58 | 44.0 | 3.20e-01 | 89.2% | 37.4% |
| 3kmaA00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.58 | 44.0 | 3.28e-01 | 86.5% | 73.3% |
| 3d6wB02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.58 | 41.0 | 4.06e-01 | 70.3% | 74.4% |
| 1u2hA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 3.16e-01 | 81.1% | 63.5% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 39.0 | 3.44e-01 | 75.7% | 72.7% |
| 4igbB02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 41.0 | 2.80e-01 | 81.1% | 48.3% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 39.0 | 2.93e-01 | 78.4% | 61.5% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.56 | 39.0 | 2.55e-01 | 73.0% | 26.1% |
| 2l9dA00 | 3.30.70.2340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF12112 family, DUF3579 | 0.55 | 39.0 | 3.05e-01 | 89.2% | 72.2% |
| 1dctA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 40.0 | 2.75e-01 | 91.9% | 86.7% |
| 2qpwA01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.55 | 38.0 | 2.81e-01 | 81.1% | 57.1% |
| 2cr6A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 39.0 | 3.09e-01 | 75.7% | 64.8% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 41.0 | 3.65e-01 | 97.3% | 59.1% |
| 2b0uD02 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.53 | 39.0 | 3.41e-01 | 94.6% | 90.3% |
| 1a2vA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.53 | 40.0 | 2.34e-01 | 100.0% | 87.7% |
| 2kxqA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.53 | 35.0 | 3.62e-01 | 70.3% | 83.3% |
| 5fm5P00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 35.0 | 2.84e-01 | 78.4% | 43.9% |
| 4rsvA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 2.98e-01 | 81.1% | 68.9% |
| 1fhgA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 36.0 | 2.82e-01 | 81.1% | 59.8% |
| 3l4yA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 38.0 | 2.70e-01 | 83.8% | 44.9% |
| 7l15A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 2.71e-01 | 75.7% | 69.0% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.51 | 35.0 | 3.15e-01 | 86.5% | 70.8% |
| 1g8kC01 | 2.60.40.4210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 2.93e-01 | 94.6% | 85.3% |
| 5jdjA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 2.94e-01 | 81.1% | 65.9% |
| 2kdgA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 2.71e-01 | 75.7% | 59.0% |
| 3pucA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 2.79e-01 | 78.4% | 78.6% |
| 3gwmA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.50 | 38.0 | 2.77e-01 | 89.2% | 38.8% |
| 2ysiA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.50 | 35.0 | 3.57e-01 | 100.0% | 75.8% |
| 3b43A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 36.0 | 2.79e-01 | 75.7% | 78.4% |
| 5joeA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 2.78e-01 | 75.7% | 65.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3540263 | 377.1.1.50 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › ZMYM4 | 0.69 | 49.0 | 4.62e-01 | 73.0% | 60.0% |
| 4346946 | 387.2.1.0 ↗ | few secondary structure elements › omega toxin-like | 0.65 | 48.0 | 4.76e-01 | 83.8% | 79.5% |
| 3599123 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 45.0 | 2.68e-01 | 86.5% | 36.5% |
| 3372361 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.60 | 50.0 | 4.95e-01 | 100.0% | 97.5% |
| 3634154 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.60 | 47.0 | 4.04e-01 | 97.3% | 53.8% |
| 3651664 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.59 | 45.0 | 2.60e-01 | 89.2% | 69.5% |
| 3504555 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.58 | 45.0 | 3.73e-01 | 94.6% | 75.0% |
| 2762489 | 377.2.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › C-terminal, Zn-finger domain of MutM-like DNA repair proteins › C-terminal, Zn-finger domain of MutM-like DNA repair proteins › Neil1-DNA_bind | 0.58 | 39.0 | 3.79e-01 | 75.7% | 55.6% |
| 3277776 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.57 | 41.0 | 3.13e-01 | 89.2% | 71.7% |
| 4282118 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.57 | 40.0 | 2.26e-01 | 78.4% | 14.3% |
| 5068179 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.57 | 43.0 | 3.41e-01 | 100.0% | 37.8% |
| 4028215 | 109.4.1.2417 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Importin_rep_6, TPR_IPO5 | 0.56 | 43.0 | 2.44e-01 | 97.3% | 64.4% |
| 3585783 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 39.0 | 2.92e-01 | 81.1% | 53.9% |
| 3581734 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 40.0 | 3.12e-01 | 81.1% | 64.2% |
| 4142148 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.55 | 39.0 | 2.17e-01 | 75.7% | 26.0% |
| 4961222 | 101.1.2.78 ↗ | alpha arrays › HTH › HTH › winged helix domain › AlkZ-like | 0.55 | 42.0 | 3.42e-01 | 94.6% | 63.5% |
| 3568734 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.55 | 38.0 | 3.03e-01 | 75.7% | 46.7% |
| 142719 | 304.145.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pfam PF12112 › Pfam PF12112 › DUF3579 | 0.55 | 39.0 | 3.05e-01 | 89.2% | 72.2% |
| 4600741 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.55 | 39.0 | 2.19e-01 | 78.4% | 8.2% |
| None | — | 0.54 | 41.0 | 2.29e-01 | 100.0% | 31.4% | |
| 3235239 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 38.0 | 2.88e-01 | 78.4% | 58.1% |
| 3580638 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 38.0 | 2.90e-01 | 78.4% | 58.1% |
| 3881240 | 3928.1.1.7 ↗ | alpha bundles › Cell division protein CrgA › Cell division protein CrgA › Cell division protein CrgA › Tmemb_55A | 0.54 | 45.0 | 3.76e-01 | 100.0% | 57.1% |
| 3907395 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.53 | 41.0 | 3.10e-01 | 89.2% | 86.0% |
| 4860073 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 38.0 | 2.93e-01 | 78.4% | 61.0% |
| 3490755 | 375.1.1.202 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tmemb_55A | 0.53 | 44.0 | 4.37e-01 | 100.0% | 100.0% |
| 3900903 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 39.0 | 2.99e-01 | 86.5% | 96.2% |
| 3956932 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.53 | 44.0 | 2.63e-01 | 100.0% | 13.2% |
| 3701275 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 44.0 | 3.04e-01 | 100.0% | 27.1% |
| 3519734 | 7523.1.1.20 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Lig_chan-Glu_bd | 0.53 | 37.0 | 2.56e-01 | 75.7% | 18.8% |
| 3575549 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 38.0 | 2.92e-01 | 81.1% | 59.0% |
| 3580637 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 38.0 | 2.86e-01 | 81.1% | 58.1% |
| 3536021 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.52 | 37.0 | 2.98e-01 | 75.7% | 49.4% |
| 3480463 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.52 | 36.0 | 3.65e-01 | 91.9% | 82.9% |
| 3933415 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.52 | 37.0 | 2.92e-01 | 78.4% | 48.4% |
| 4022213 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 40.0 | 2.27e-01 | 94.6% | 14.0% |
| 3865776 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.51 | 38.0 | 2.91e-01 | 83.8% | 32.4% |
| 3574535 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.51 | 36.0 | 3.01e-01 | 75.7% | 52.5% |
| 3937277 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.51 | 35.0 | 2.72e-01 | 73.0% | 58.1% |
| 2723161 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.51 | 39.0 | 3.02e-01 | 89.2% | 80.0% |
| 4567489 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.50 | 34.0 | 2.57e-01 | 75.7% | 49.6% |