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HM246721.1__AEI88202.1__X__00026
Bact-VirHM246721.1__AEI88202.1__X__00026
Identity
- Accession:
- HM246721 ↗
- Kingdom:
- phage
Quality
90.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Connertonviridae›
Firehammervirus›
Campylobacter_phage_vB_CcoM-IBB_35
TaxID: 2920889
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-140
Domain cluster:
rep: FN667788.1__CBJ93835.1__CPT_0026__00026__D40-166
D2
high
residues 147-218
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qthB00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.58 | 47.0 | 3.65e-01 | 90.3% | 86.6% |
| 1cl8A00 | 3.40.580.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RI Endonuclease; Chain A › Eco RI Endonuclease, subunit A | 0.57 | 43.0 | 2.94e-01 | 80.6% | 84.3% |
| 1f1jA00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 41.0 | 2.99e-01 | 80.6% | 63.0% |
| 6swc801 | 3.30.30.170 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.51 | 39.0 | 3.42e-01 | 86.1% | 73.3% |
| 2hlyA00 | 3.10.550.10 | Alpha Beta › Roll › Atu2299-like › Hypothetical protein Atu2299 | 0.51 | 43.0 | 3.22e-01 | 98.6% | 66.8% |
| 1d5aA02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 44.0 | 3.21e-01 | 100.0% | 44.7% |
| 2wmiA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 43.0 | 2.75e-01 | 95.8% | 31.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3962779 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.60 | 44.0 | 3.54e-01 | 80.6% | 71.6% |
| 11005 | 2008.1.1.9 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › EcoRI | 0.60 | 44.0 | 3.02e-01 | 79.2% | 84.7% |
| 4521826 | 160.1.1.1 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_ab_C | 0.55 | 46.0 | 3.55e-01 | 97.2% | 57.3% |
| 3715995 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.54 | 47.0 | 3.03e-01 | 98.6% | 24.6% |
| 3874383 | 7575.1.1.1 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C14 | 0.54 | 42.0 | 3.30e-01 | 88.9% | 53.1% |
| 4027960 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.54 | 43.0 | 4.29e-01 | 90.3% | 98.7% |
| 3414782 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 40.0 | 2.74e-01 | 93.1% | 82.3% |
| 3239406 | 604.29.1.1 ↗ | alpha bundles › Spectrin repeat-like › Trehalose-6-phosphate phosphatase N-terminal helical bundle › Trehalose-6-phosphate phosphatase N-terminal helical bundle › T6PP_N | 0.51 | 35.0 | 3.15e-01 | 75.0% | 87.8% |
| 3692316 | 7579.1.1.9 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Esterase | 0.51 | 40.0 | 2.61e-01 | 91.7% | 53.4% |
| 3956228 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.51 | 37.0 | 3.71e-01 | 94.4% | 76.0% |
| 4471483 | 604.29.1.1 ↗ | alpha bundles › Spectrin repeat-like › Trehalose-6-phosphate phosphatase N-terminal helical bundle › Trehalose-6-phosphate phosphatase N-terminal helical bundle › T6PP_N | 0.50 | 35.0 | 3.10e-01 | 75.0% | 86.7% |
| 3596734 | 574.1.1.0 ↗ | alpha bundles › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp module (SWAP domain) | 0.50 | 35.0 | 3.35e-01 | 77.8% | 76.8% |
D3
high
residues 233-338
Domain cluster:
rep: FN667788.1__CBJ93835.1__CPT_0026__00026__D258-335