Back to structures

HM246721.1__AEI88227.1__X__00051

Bact-Vir

HM246721.1__AEI88227.1__X__00051

Identity

Accession:
HM246721 ↗
Kingdom:
phage

Quality

67.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-103
PDB
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.90 85.0 6.76e-01 100.0% 70.8%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.90 85.0 6.77e-01 100.0% 68.2%
1am2A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.90 85.0 6.61e-01 100.0% 79.6%
2imzA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.88 83.0 7.06e-01 100.0% 81.0%
1mi8A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.88 83.0 7.05e-01 100.0% 77.3%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 82.0 6.54e-01 100.0% 70.4%
4e2tB00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 81.0 6.53e-01 100.0% 71.0%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 82.0 6.90e-01 100.0% 81.4%
6vgwA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 81.0 6.92e-01 100.0% 70.2%
2jmzA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.86 80.0 6.47e-01 100.0% 69.6%
1dq3A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.86 80.0 6.36e-01 100.0% 71.2%
2lcjA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.86 80.0 6.22e-01 100.0% 74.1%
2lwyA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.86 79.0 6.86e-01 100.0% 79.7%
1zdeA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.85 78.0 6.43e-01 100.0% 75.0%
1dfaA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.82 76.0 5.81e-01 100.0% 87.1%
6zgqA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 74.0 6.25e-01 100.0% 84.4%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4997601 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.91 86.0 7.35e-01 100.0% 82.9%
4993128 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.91 86.0 6.95e-01 100.0% 78.8%
3949431 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.91 85.0 7.10e-01 100.0% 76.0%
4993437 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.90 85.0 7.19e-01 100.0% 87.5%
3952464 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.90 86.0 7.19e-01 100.0% 73.8%
4544734 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.90 85.0 6.33e-01 100.0% 82.9%
4335483 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.90 85.0 6.20e-01 100.0% 79.1%
3282306 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 85.0 7.35e-01 100.0% 78.5%
4993853 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 85.0 6.83e-01 100.0% 70.3%
4152516 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 85.0 7.32e-01 100.0% 78.5%
5066389 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.90 84.0 6.48e-01 100.0% 71.6%
4994372 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 84.0 7.57e-01 98.9% 80.8%
4127166 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.90 85.0 7.04e-01 100.0% 82.7%
4457379 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 84.0 7.09e-01 100.0% 72.4%
3603738 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 83.0 7.10e-01 98.9% 78.6%
4975503 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 84.0 6.54e-01 100.0% 73.9%
4992473 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 83.0 6.66e-01 100.0% 74.7%
4979631 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 84.0 6.97e-01 100.0% 71.3%
4982797 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 83.0 7.04e-01 100.0% 78.6%
4993480 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 83.0 6.79e-01 100.0% 68.8%
3234017 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.89 84.0 6.63e-01 100.0% 75.0%
3215378 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.89 84.0 6.95e-01 100.0% 82.7%
4971400 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 83.0 5.65e-01 100.0% 38.3%
4975578 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 83.0 5.75e-01 100.0% 41.1%
5023539 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 83.0 6.82e-01 100.0% 70.3%
5029540 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 83.0 6.76e-01 100.0% 71.2%
5030847 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 83.0 6.76e-01 100.0% 75.0%
5014854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 82.0 6.12e-01 100.0% 75.3%
4039971 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 83.0 6.54e-01 100.0% 70.3%
2445477 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 83.0 6.84e-01 100.0% 71.4%
4291841 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 83.0 6.68e-01 100.0% 70.9%
3604383 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 83.0 6.13e-01 100.0% 81.4%
3257888 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 83.0 6.90e-01 100.0% 82.0%
3511246 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.88 83.0 6.69e-01 100.0% 73.9%
3936057 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.88 83.0 6.86e-01 100.0% 81.8%
4997597 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 83.0 6.89e-01 100.0% 77.3%
4943231 69.1.1.16 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › ATP-synt_ab 0.88 82.0 6.47e-01 100.0% 70.6%
4070999 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.88 83.0 6.84e-01 100.0% 76.1%
4946209 69.1.1.18 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › DNA_topoisoIV 0.88 82.0 6.20e-01 100.0% 87.8%
3603291 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 82.0 6.52e-01 100.0% 65.1%
4930925 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 82.0 7.04e-01 100.0% 78.6%
2524072 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 83.0 6.59e-01 100.0% 70.6%
3934143 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.88 83.0 7.07e-01 100.0% 82.1%
4945569 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 82.0 6.79e-01 100.0% 77.4%
4600944 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 83.0 6.53e-01 100.0% 67.4%
5013937 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 83.0 6.65e-01 100.0% 72.1%
4586920 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 82.0 6.79e-01 100.0% 80.6%
4487998 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.88 83.0 6.53e-01 100.0% 67.4%
5066163 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 82.0 7.03e-01 100.0% 81.4%
4979524 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 82.0 5.83e-01 100.0% 78.8%
4983458 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 82.0 6.63e-01 100.0% 70.9%
4940943 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 82.0 6.57e-01 100.0% 71.8%
4993808 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 82.0 6.92e-01 100.0% 77.9%
2553113 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 82.0 7.23e-01 100.0% 78.1%
5046393 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 82.0 6.86e-01 100.0% 71.3%
5012957 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 82.0 6.47e-01 100.0% 69.7%
4993813 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 81.0 6.66e-01 100.0% 70.6%
4948019 69.1.1.17 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › MCM 0.87 82.0 6.47e-01 100.0% 72.6%
3877825 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.87 82.0 6.09e-01 100.0% 60.0%
5030499 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 81.0 6.75e-01 98.9% 79.3%
4978263 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 81.0 6.57e-01 100.0% 67.9%
5013038 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 81.0 6.63e-01 100.0% 67.5%
4933756 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 81.0 6.97e-01 100.0% 82.1%
4998392 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 81.0 6.55e-01 100.0% 78.8%
4629526 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 81.0 5.45e-01 100.0% 87.7%
5022295 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 81.0 6.54e-01 100.0% 67.9%
3517362 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.87 81.0 6.89e-01 100.0% 80.6%
5078549 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 81.0 6.62e-01 100.0% 70.6%
2636473 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 81.0 6.85e-01 100.0% 68.3%
3230518 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.87 81.0 6.71e-01 100.0% 81.3%
4971412 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 80.0 6.24e-01 97.8% 72.8%
4315406 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 81.0 6.36e-01 100.0% 83.9%
3518586 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.87 81.0 6.12e-01 100.0% 58.5%
4999902 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 80.0 6.82e-01 100.0% 82.8%
4940699 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 81.0 6.68e-01 100.0% 83.2%
5014852 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 81.0 6.86e-01 100.0% 66.9%
4977673 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 81.0 5.92e-01 100.0% 95.1%
5029355 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 80.0 6.74e-01 100.0% 78.0%
4993871 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 63.0 5.78e-01 75.3% 80.0%
5052154 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 80.0 6.47e-01 100.0% 70.3%
4993732 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 81.0 7.20e-01 100.0% 76.8%
259963 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.86 79.0 6.86e-01 100.0% 79.7%
4997604 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 80.0 6.38e-01 100.0% 65.9%
3604113 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 79.0 6.73e-01 100.0% 76.6%
5065032 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 79.0 6.43e-01 100.0% 82.4%
5029854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 78.0 5.88e-01 100.0% 72.4%
3604439 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 78.0 6.27e-01 100.0% 68.2%
5002632 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 78.0 6.57e-01 100.0% 75.2%
2323756 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 78.0 6.42e-01 100.0% 82.3%
4930433 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 77.0 6.42e-01 100.0% 76.8%
4932851 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.79 73.0 6.37e-01 100.0% 80.0%
3640623 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.52 38.0 3.69e-01 77.4% 84.8%