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HM246722.1__AEF56824.1__X__00022
Bact-VirHM246722.1__AEF56824.1__X__00022
Identity
- Accession:
- HM246722 ↗
- Kingdom:
- phage
Quality
69.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Connertonviridae›
Firehammervirus›
Campylobacter_phage_vB_CcoM-IBB_35
TaxID: 2920889
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-59
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uaaA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.59 | 42.0 | 3.87e-01 | 75.9% | 58.1% |
| 1qdmA03 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.56 | 38.0 | 3.53e-01 | 70.7% | 77.9% |
| 1umqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 39.0 | 3.88e-01 | 72.4% | 76.7% |
| 2yxyA01 | 1.10.287.880 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Hypothetical protein YfhH domain | 0.55 | 39.0 | 4.19e-01 | 75.9% | 94.0% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 39.0 | 3.40e-01 | 75.9% | 94.5% |
| 2fx0A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 45.0 | 3.60e-01 | 98.3% | 81.1% |
| 4uurA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 42.0 | 3.51e-01 | 98.3% | 83.1% |
| 1yy7A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 37.0 | 3.23e-01 | 79.3% | 88.6% |
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 37.0 | 3.43e-01 | 74.1% | 67.6% |
| 2jx4A01 | 6.10.140.460 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 33.0 | 3.49e-01 | 72.4% | 75.0% |
| 1s3qG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 36.0 | 2.70e-01 | 75.9% | 42.9% |
| 3h5tA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.50 | 31.0 | 3.32e-01 | 70.7% | 74.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3504528 | 109.4.1.1333 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps35, PF27614 | 0.60 | 48.0 | 2.90e-01 | 94.8% | 32.6% |
| 3904047 | 9.26.1.0 ↗ | beta barrels › Lipocalins/Streptavidin | 0.57 | 39.0 | 2.80e-01 | 72.4% | 52.4% |
| 3823212 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.56 | 44.0 | 3.38e-01 | 87.9% | 81.4% |
| 5075517 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.55 | 46.0 | 3.49e-01 | 94.8% | 66.2% |
| 3927560 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.55 | 35.0 | 3.51e-01 | 70.7% | 63.3% |
| 3480029 | 5069.1.1.7 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561 | 0.54 | 41.0 | 2.91e-01 | 82.8% | 77.0% |
| 1868087 | 622.1.1.2 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HsbA | 0.52 | 37.0 | 3.37e-01 | 77.6% | 88.4% |
| 4105677 | 150.1.1.59 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Coat_F | 0.52 | 34.0 | 3.00e-01 | 74.1% | 44.4% |
| 4086642 | 7516.1.1.102 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2, Glyco_trans_2_3 | 0.51 | 43.0 | 2.55e-01 | 100.0% | 44.9% |
| 4039014 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.50 | 36.0 | 2.90e-01 | 75.9% | 60.9% |