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HM452125.1__ADM79614.1__phiAS4_ORF0042__00042

Bact-Vir

HM452125.1__ADM79614.1__phiAS4_ORF0042__00042

Identity

Accession:
HM452125 ↗
Kingdom:
phage

Quality

85.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Tulanevirus› Aeromonas_phage_phiAS4

TaxID: 879628

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 64-115
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a0tA01 6.20.80.10 Special › Other non-globular › Glycosyl hydrolase fold › 0.74 60.0 5.74e-01 90.4% 78.7%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.67 48.0 3.14e-01 76.9% 22.2%
3g5kA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.61 41.0 2.92e-01 73.1% 69.4%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.59 40.0 3.23e-01 71.2% 44.0%
2cxhA01 3.40.50.10480 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain 0.56 42.0 3.02e-01 84.6% 78.2%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.55 43.0 3.61e-01 94.2% 100.0%
3n7zA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 40.0 3.01e-01 75.0% 40.2%
3ab1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 36.0 2.81e-01 71.2% 91.3%
1dgmA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 43.0 2.79e-01 94.2% 34.4%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.53 36.0 3.10e-01 73.1% 40.4%
4mbrA01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 41.0 3.23e-01 100.0% 58.7%
5vawA01 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.53 41.0 3.42e-01 98.1% 73.3%
4mboA01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 41.0 3.18e-01 98.1% 57.6%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.51 40.0 3.71e-01 100.0% 73.8%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1395707 5084.5.1.16 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BVU_2266-like 0.67 48.0 3.14e-01 76.9% 22.2%
2417913 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.60 51.0 3.09e-01 100.0% 19.4%
1841016 79.1.1.9 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer 0.60 51.0 3.38e-01 100.0% 32.8%
3909007 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 42.0 3.34e-01 100.0% 37.3%
5081301 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.57 40.0 2.44e-01 75.0% 22.8%
3774120 4320.1.1.1 ↗ alpha superhelices › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like › TFIID_NTD2 0.55 41.0 2.67e-01 78.8% 89.1%
4929797 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.54 39.0 3.79e-01 78.8% 91.5%
3239518 4099.1.1.28 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29108 0.54 37.0 3.35e-01 73.1% 50.0%
3184544 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.53 37.0 2.81e-01 78.8% 30.5%
3724924 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.53 41.0 2.55e-01 92.3% 30.8%
3744672 298.1.1.0 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.52 40.0 2.99e-01 92.3% 66.1%
5028909 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.51 41.0 2.47e-01 100.0% 15.3%
3788029 5.1.3.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.51 40.0 2.74e-01 92.3% 52.5%
3969059 213.1.1.31 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.51 39.0 2.93e-01 82.7% 52.6%
3512816 5.1.4.313 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 0.51 39.0 2.52e-01 96.2% 63.4%
3989855 706.2.1.8 ↗ beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › CFSR 0.51 34.0 3.16e-01 71.2% 90.0%
5035835 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.50 34.0 3.36e-01 71.2% 76.7%
5029710 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 42.0 2.73e-01 100.0% 80.0%