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HM452125.1__ADM79712.1__phiAS4_ORF0140__00140

Bact-Vir

HM452125.1__ADM79712.1__phiAS4_ORF0140__00140

Identity

Accession:
HM452125 ↗
Kingdom:
phage

Quality

83.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 105-156
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26869.1 best Phage_T4_gp2 94.8 6.10e-27 100.0% 20.1%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6r8gB02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.56 43.0 3.01e-01 94.2% 25.9%
4go6B01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 36.0 3.50e-01 75.0% 95.0%
7cm3A01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 43.0 3.09e-01 98.1% 56.7%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3343055 2004.1.1.168 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRPRB 0.52 38.0 2.49e-01 98.1% 16.2%
4640013 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.50 37.0 2.53e-01 86.5% 40.5%
3177328 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.50 34.0 2.25e-01 94.2% 14.8%
D2 medium residues 15-97
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26869.1 best Phage_T4_gp2 96.4 2.10e-27 100.0% 32.0%