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HM452125.1__ADM79712.1__phiAS4_ORF0140__00140
Bact-VirHM452125.1__ADM79712.1__phiAS4_ORF0140__00140
Identity
- Accession:
- HM452125 ↗
- Kingdom:
- phage
Quality
83.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Tulanevirus›
Aeromonas_phage_phiAS4
TaxID: 879628
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 105-156
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26869.1 best | Phage_T4_gp2 | 94.8 | 6.10e-27 | 100.0% | 20.1% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6r8gB02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.56 | 43.0 | 3.01e-01 | 94.2% | 25.9% |
| 4go6B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 36.0 | 3.50e-01 | 75.0% | 95.0% |
| 7cm3A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 43.0 | 3.09e-01 | 98.1% | 56.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3343055 | 2004.1.1.168 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRPRB | 0.52 | 38.0 | 2.49e-01 | 98.1% | 16.2% |
| 4640013 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.50 | 37.0 | 2.53e-01 | 86.5% | 40.5% |
| 3177328 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.50 | 34.0 | 2.25e-01 | 94.2% | 14.8% |
D2
medium
residues 15-97
Domain cluster:
rep: NC_008208.1__YP_656360.1__PHG25ORF125c__00129__D15-73
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26869.1 best | Phage_T4_gp2 | 96.4 | 2.10e-27 | 100.0% | 32.0% |