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HM486077.1__ADX31951.1__X__00037

Bact-Vir

HM486077.1__ADX31951.1__X__00037

Identity

Accession:
HM486077 ↗
Kingdom:
phage

Quality

74.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 33-65_136-160
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 41.0 3.70e-01 79.3% 69.1%
3rfzA02 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.53 36.0 3.05e-01 75.9% 100.0%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4644476 304.139.1.0 a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related 0.59 43.0 2.85e-01 82.8% 85.5%
3174934 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.55 42.0 2.65e-01 84.5% 25.1%
3690571 4317.1.1.0 a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like 0.54 36.0 3.23e-01 82.8% 48.2%
3971622 327.13.1.2 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › YscJ_FliF_C 0.53 36.0 2.82e-01 74.1% 43.6%
4017880 3385.1.1.0 beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 0.52 39.0 3.05e-01 86.2% 74.3%
3262355 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.52 32.0 2.79e-01 75.9% 38.7%
3569162 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.51 38.0 2.23e-01 82.8% 12.1%
3790670 304.44.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 0.51 40.0 3.00e-01 87.9% 52.0%
3564773 2002.1.1.106 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.50 40.0 2.52e-01 89.7% 45.2%
D2 medium residues 66-135
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6d92A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 44.0 3.21e-01 98.6% 77.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4951634 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 3.59e-01 97.1% 50.7%