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HM486077.1__ADX31984.1__X__00070
Bact-VirHM486077.1__ADX31984.1__X__00070
Identity
- Accession:
- HM486077 ↗
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 50-93
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.74 | 64.0 | 5.14e-01 | 100.0% | 50.0% |
| 3pyoY00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 56.0 | 5.00e-01 | 95.5% | 66.1% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.68 | 57.0 | 4.81e-01 | 97.7% | 98.7% |
| 1yzmA00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.68 | 57.0 | 5.70e-01 | 97.7% | 95.7% |
| 5j1hA01 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 54.0 | 3.68e-01 | 100.0% | 23.6% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 52.0 | 4.51e-01 | 97.7% | 53.2% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 54.0 | 4.67e-01 | 100.0% | 57.5% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.65 | 56.0 | 5.14e-01 | 100.0% | 98.3% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 51.0 | 3.45e-01 | 100.0% | 24.7% |
| 2btqB03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.60 | 52.0 | 4.97e-01 | 100.0% | 90.6% |
| 3we0A03 | 1.10.405.40 | Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › | 0.59 | 45.0 | 3.28e-01 | 90.9% | 51.1% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 49.0 | 4.62e-01 | 100.0% | 75.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4410582 | 192.28.1.1 ↗ | alpha bundles › Long alpha-hairpin › IDEAL domain › IDEAL domain › IDEAL | 0.70 | 59.0 | 5.50e-01 | 97.7% | 76.4% |
| 3281235 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.70 | 56.0 | 4.69e-01 | 88.6% | 53.3% |
| 3976258 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.70 | 60.0 | 5.61e-01 | 97.7% | 78.2% |
| 4642864 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.70 | 60.0 | 5.81e-01 | 100.0% | 90.0% |
| 3218207 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.69 | 60.0 | 4.19e-01 | 100.0% | 79.3% |
| 3927560 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.66 | 57.0 | 5.23e-01 | 100.0% | 91.7% |
| 5069130 | 6026.1.1.0 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain | 0.66 | 54.0 | 5.25e-01 | 97.7% | 82.0% |
| 4405928 | 5086.1.1.196 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_YknX | 0.66 | 57.0 | 4.95e-01 | 100.0% | 78.6% |
| 4052416 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.66 | 57.0 | 4.68e-01 | 97.7% | 55.0% |
| 4395525 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.66 | 56.0 | 4.95e-01 | 97.7% | 67.7% |
| 3614068 | 5055.1.1.0 ↗ | extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel | 0.66 | 56.0 | 4.62e-01 | 97.7% | 60.0% |
| 4083492 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.65 | 55.0 | 4.87e-01 | 97.7% | 67.7% |
| 4942772 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.65 | 54.0 | 4.75e-01 | 97.7% | 63.1% |
| 4629340 | 3928.1.1.1 ↗ | alpha bundles › Cell division protein CrgA › Cell division protein CrgA › Cell division protein CrgA › CrgA | 0.63 | 53.0 | 5.03e-01 | 100.0% | 100.0% |
| 3599779 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.59 | 46.0 | 2.98e-01 | 95.5% | 26.7% |
| 3349591 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.56 | 47.0 | 2.89e-01 | 100.0% | 19.7% |