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HM486077.1__ADX31986.1__X__00072
Bact-VirHM486077.1__ADX31986.1__X__00072
Identity
- Accession:
- HM486077 ↗
- Kingdom:
- phage
Quality
74.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-137
Domain cluster:
rep: NC_031253.1__YP_009303156.1__KCH39_gp008__00008__D3-100
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.65 | 35.0 | 3.87e-01 | 76.6% | 64.0% |
| 2paqA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.60 | 48.0 | 4.02e-01 | 85.0% | 58.2% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 44.0 | 4.51e-01 | 85.0% | 82.9% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 3.27e-01 | 70.1% | 79.5% |
| 2a2cA03 | 1.20.1440.340 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.52 | 43.0 | 3.99e-01 | 88.8% | 84.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4541333 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 39.0 | 5.98e-01 | 81.3% | 100.0% |
| 4863786 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.82 | 42.0 | 5.91e-01 | 86.0% | 100.0% |
| 3987867 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 38.0 | 5.64e-01 | 81.3% | 100.0% |
| 4102958 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.79 | 40.0 | 5.10e-01 | 84.1% | 81.5% |
| None | — | 0.75 | 45.0 | 4.56e-01 | 86.9% | 61.0% | |
| 4140444 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.74 | 45.0 | 4.45e-01 | 86.9% | 58.2% |
| 4037682 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.72 | 43.0 | 4.50e-01 | 86.9% | 64.0% |
| 4174590 | 101.1.2.61 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 | 0.71 | 41.0 | 5.27e-01 | 88.8% | 95.4% |
| None | — | 0.70 | 42.0 | 4.24e-01 | 86.9% | 58.2% | |
| 3389609 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.56 | 35.0 | 4.15e-01 | 99.1% | 95.7% |
| 4683324 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.54 | 45.0 | 4.47e-01 | 86.9% | 89.1% |
| None | — | 0.53 | 42.0 | 4.31e-01 | 86.0% | 85.7% | |
| None | — | 0.52 | 43.0 | 4.33e-01 | 86.9% | 85.3% | |
| 4148347 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.52 | 43.0 | 4.39e-01 | 86.9% | 88.5% |