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HM596271.1__ADP69195.1__X__00011

Bact-Vir

HM596271.1__ADP69195.1__X__00011

Identity

Accession:
HM596271 ↗
Kingdom:
phage

Quality

72.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-136
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ntxA01 1.20.58.2010 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 1 0.81 61.0 5.08e-01 77.3% 64.3%
1wrdA00 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 56.0 6.40e-01 74.2% 100.0%
2jqqA00 1.20.58.1240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 56.0 5.27e-01 78.1% 61.7%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.77 61.0 5.62e-01 83.6% 93.9%
1uurA01 1.20.58.240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 0.76 54.0 5.73e-01 72.7% 98.2%
3nvoB02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.75 57.0 6.00e-01 79.7% 97.4%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.74 54.0 5.99e-01 75.0% 100.0%
2v0xA01 1.10.287.3160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.73 51.0 4.64e-01 71.1% 76.2%
3ck6C02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.73 57.0 5.92e-01 81.2% 95.0%
3u8vA00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.73 38.0 4.60e-01 70.3% 77.1%
1ugoA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.71 47.0 5.23e-01 71.9% 85.9%
1owaA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 52.0 5.64e-01 75.8% 98.1%
7smtA02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.71 50.0 4.52e-01 78.9% 53.4%
6wv5A01 1.20.1440.130 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain 0.71 49.0 4.84e-01 71.1% 75.0%
1vcsA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.70 48.0 5.36e-01 70.3% 88.2%
1o5hA00 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.70 53.0 4.55e-01 78.9% 61.0%
1aj3A00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 49.0 5.43e-01 71.1% 100.0%
5nl6A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 52.0 5.61e-01 77.3% 97.2%
2i0mA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.70 52.0 5.62e-01 77.3% 96.2%
3hiuD00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.69 53.0 5.00e-01 80.5% 99.3%
4eahA00 1.20.58.2220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain 0.69 52.0 3.76e-01 79.7% 67.5%
3d19B00 1.20.1260.120 Mainly Alpha › Up-down Bundle › Ferritin › Protein of unknown function DUF2935 0.68 50.0 3.93e-01 76.6% 64.5%
3qc1A01 1.25.40.540 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TAP42-like family 0.66 48.0 4.57e-01 75.8% 65.6%
3agtA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.65 43.0 4.26e-01 71.9% 63.9%
1sumB02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.65 54.0 5.65e-01 97.7% 97.5%
4rngC00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.65 41.0 4.87e-01 71.9% 97.6%
1jogA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.64 42.0 4.12e-01 72.7% 62.2%
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 54.0 5.48e-01 92.2% 93.8%
2o8pA00 1.20.190.20 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain 0.63 49.0 4.13e-01 82.8% 83.6%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.63 49.0 4.51e-01 82.8% 82.2%
2iakA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 56.0 4.89e-01 98.4% 79.7%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.59 43.0 4.52e-01 75.8% 100.0%
6vudA01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.59 42.0 4.43e-01 73.4% 98.2%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.52 41.0 3.93e-01 82.8% 85.3%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3718789 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.82 66.0 5.01e-01 82.8% 66.3%
5029968 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.82 63.0 4.90e-01 79.7% 68.2%
3615028 622.1.1.1 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.81 58.0 6.27e-01 77.3% 85.5%
5058507 603.2.1.0 alpha bundles › STAT-like › STAT › STAT 0.81 60.0 6.14e-01 76.6% 86.4%
5054107 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.81 61.0 4.81e-01 78.1% 69.0%
3794988 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.80 57.0 5.84e-01 73.4% 80.8%
4567957 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.79 59.0 6.16e-01 77.3% 93.0%
3488291 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.78 58.0 6.31e-01 75.8% 100.0%
3505493 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.78 63.0 6.36e-01 84.4% 90.4%
5027312 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.78 56.0 6.18e-01 73.4% 96.1%
4995305 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.77 53.0 6.09e-01 70.3% 97.9%
3991109 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.77 58.0 5.65e-01 78.1% 80.0%
4960871 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.77 61.0 4.80e-01 82.8% 62.4%
4557092 633.23.1.32 alpha bundles › Bromodomain-like › Claudin › Claudin › CASP_dom 0.77 59.0 5.61e-01 79.7% 82.4%
3902164 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.77 58.0 5.94e-01 79.7% 91.2%
3772680 633.23.1.34 alpha bundles › Bromodomain-like › Claudin › Claudin › CD20 0.77 59.0 5.41e-01 79.7% 78.1%
3788202 109.10.1.1 alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin 0.76 57.0 4.44e-01 76.6% 57.3%
3924662 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.76 54.0 6.14e-01 72.7% 100.0%
3225274 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.76 60.0 5.09e-01 82.0% 81.5%
3497641 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.76 52.0 5.85e-01 70.3% 100.0%
3934523 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.76 55.0 6.22e-01 75.8% 100.0%
3503329 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.76 52.0 5.93e-01 70.3% 100.0%
4968762 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.75 57.0 5.95e-01 78.1% 90.4%
3543089 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.75 47.0 5.53e-01 70.3% 90.0%
3852486 174.1.1.43 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.75 60.0 5.67e-01 83.6% 80.0%
4947640 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.75 59.0 4.61e-01 82.0% 70.2%
3224585 603.1.1.99 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 0.75 58.0 6.22e-01 81.2% 98.2%
3927597 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.75 57.0 5.93e-01 79.7% 100.0%
3176648 603.1.1.6 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 0.75 61.0 5.18e-01 85.9% 67.0%
4600893 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.74 58.0 4.55e-01 82.0% 57.7%
3765032 633.23.1.34 alpha bundles › Bromodomain-like › Claudin › Claudin › CD20 0.74 58.0 5.57e-01 82.0% 80.0%
4942097 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.74 52.0 4.32e-01 72.7% 75.9%
3733145 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.74 58.0 5.65e-01 82.0% 84.3%
4976784 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.74 54.0 5.82e-01 78.1% 89.1%
5005528 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.74 54.0 5.98e-01 75.8% 98.0%
5016617 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.73 58.0 4.47e-01 82.8% 64.4%
3504305 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.73 56.0 6.09e-01 78.9% 97.1%
3741038 633.23.1.9 alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 0.73 59.0 4.95e-01 84.4% 78.1%
3974263 5094.1.1.1 a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH 0.73 53.0 5.15e-01 74.2% 72.1%
3390014 174.1.1.1 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.73 56.0 5.28e-01 78.9% 80.0%
3420023 633.21.1.18 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom 0.73 55.0 5.06e-01 78.9% 74.5%
4946897 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.73 58.0 5.24e-01 83.6% 97.1%
5063996 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.73 55.0 4.54e-01 78.9% 64.4%
3919843 604.1.1.124 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_6 0.73 57.0 5.73e-01 82.8% 99.2%
3526861 603.1.1.99 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 0.73 57.0 6.12e-01 82.8% 97.3%
3276433 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.73 56.0 4.55e-01 80.5% 88.3%
3533309 603.1.1.3 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.72 55.0 5.97e-01 79.7% 99.0%
3690029 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.72 56.0 5.04e-01 82.0% 71.4%
3935030 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.71 52.0 5.67e-01 75.8% 100.0%
2722116 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.71 52.0 4.48e-01 75.8% 65.3%
5083098 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.71 52.0 5.87e-01 75.8% 98.0%
3276921 603.1.1.3 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.71 50.0 4.84e-01 72.7% 65.5%
3216366 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.70 54.0 4.93e-01 81.2% 70.0%
3583103 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.69 50.0 4.27e-01 81.2% 47.7%
5046163 601.1.2.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.69 49.0 4.84e-01 72.7% 81.5%
3845927 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.69 54.0 5.19e-01 83.6% 78.0%
3596375 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.69 51.0 5.21e-01 77.3% 99.2%
4254412 7516.1.1.117 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2, Cellulose_synt, Glyco_trans_2_3 0.69 49.0 3.11e-01 72.7% 88.8%
4511937 603.1.1.139 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE_C, PF27021 0.68 61.0 5.84e-01 99.2% 87.3%
3237954 603.1.1.139 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE_C, PF27021 0.67 61.0 5.74e-01 99.2% 90.3%
4991399 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.67 44.0 5.21e-01 71.9% 100.0%
3929097 4163.1.1.0 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like 0.67 60.0 5.99e-01 95.3% 100.0%
4144345 4163.1.1.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.66 57.0 5.19e-01 92.2% 89.7%
3818733 4163.1.1.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.66 55.0 5.26e-01 89.1% 89.0%
3734382 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.65 48.0 3.79e-01 78.1% 69.0%
1248638 603.3.1.1 alpha bundles › STAT-like › CAPPD, an extracellular domain of amyloid beta A4 protein › CAPPD, an extracellular domain of amyloid beta A4 protein › APP_E2 0.65 44.0 4.75e-01 70.3% 93.6%
4950911 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.64 50.0 4.83e-01 98.4% 73.1%
3510367 603.1.1.99 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 0.60 54.0 5.10e-01 99.2% 87.7%
3699649 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.58 53.0 4.84e-01 100.0% 80.0%