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HM997019.1__AEK82051.1__X__00136

Bact-Vir

HM997019.1__AEK82051.1__X__00136

Identity

Accession:
HM997019 ↗
Kingdom:
phage

Quality

74.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Grimontviridae› Moazamivirus› Salmonella_phage_7-11

TaxID: 1054968

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-68
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bx9A00 6.20.20.10 Special › Other non-globular › Chaperone, DNAj Protein; Chain A › 0.70 46.0 5.02e-01 90.5% 81.1%
1exkA00 2.10.230.10 Mainly Beta › Ribbon › Chaperone, DNAj Protein; Chain A › Heat shock protein DnaJ, cysteine-rich domain 0.65 46.0 4.26e-01 81.0% 58.2%
1tzlA02 3.30.1920.50 Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › 0.62 31.0 3.12e-01 100.0% 46.8%
2qx2A00 3.10.570.10 Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain 0.56 47.0 3.07e-01 98.4% 40.9%
3ib5A00 3.10.570.10 Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain 0.54 45.0 2.94e-01 100.0% 45.0%
6l3tA01 1.20.1440.80 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain 0.53 44.0 3.24e-01 100.0% 32.7%
6wngA02 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.53 44.0 3.01e-01 100.0% 69.7%
4ritA01 3.90.1150.170 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.51 41.0 2.84e-01 90.5% 24.9%
6oyfA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.51 43.0 3.32e-01 100.0% 70.0%
1mtpA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 30.0 2.68e-01 100.0% 39.6%
3cexA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.51 40.0 3.10e-01 93.7% 84.7%
1xexB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 32.0 2.43e-01 96.8% 24.8%
2jisA01 3.90.1150.170 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.50 40.0 2.77e-01 90.5% 23.8%
4joiC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 40.0 3.30e-01 88.9% 94.1%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4060106 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.78 47.0 5.81e-01 71.4% 95.0%
4885912 67.1.1.6 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG 0.76 49.0 5.07e-01 71.4% 70.0%
3245954 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.76 49.0 4.73e-01 71.4% 60.0%
1313606 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.74 55.0 5.96e-01 79.4% 96.3%
4208701 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.73 47.0 4.31e-01 71.4% 52.5%
3405173 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.73 45.0 4.39e-01 71.4% 57.1%
3572265 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.70 45.0 4.32e-01 71.4% 58.6%
3318682 361.1.1.4 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DUF5351 0.70 55.0 5.48e-01 85.7% 80.0%
4976959 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.70 48.0 4.52e-01 71.4% 61.3%
3662770 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.69 48.0 5.37e-01 71.4% 92.0%
3598708 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.69 50.0 4.84e-01 76.2% 84.3%
4000324 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.68 47.0 4.46e-01 71.4% 61.3%
4945234 361.1.1.20 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_C 0.68 47.0 4.65e-01 71.4% 70.8%
4466486 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.68 47.0 4.50e-01 71.4% 64.3%
4024146 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.67 47.0 5.32e-01 76.2% 92.0%
4592703 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.67 48.0 5.10e-01 76.2% 83.6%
4351918 67.1.1.4 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG, DnaJ_C 0.67 46.0 3.32e-01 71.4% 27.6%
4231511 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.66 49.0 3.53e-01 76.2% 30.3%
4220475 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.66 48.0 4.47e-01 76.2% 62.7%
5057890 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.64 46.0 3.46e-01 76.2% 32.4%
3352509 361.1.1.14 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › PF30758 0.64 51.0 4.85e-01 90.5% 73.3%
4080896 67.1.1.4 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG, DnaJ_C 0.63 46.0 3.40e-01 81.0% 31.0%
4259493 361.1.1.1 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG 0.63 43.0 4.30e-01 71.4% 69.2%
3403576 375.1.1.316 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › GRXCR1-2_C 0.60 41.0 4.66e-01 73.0% 97.8%
3816662 361.1.1.18 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › zf-AtTam37 0.60 49.0 5.26e-01 88.9% 100.0%
3816323 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.58 45.0 4.67e-01 84.1% 86.7%
3374729 361.1.1.0 ↗ few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain 0.57 45.0 4.25e-01 84.1% 71.6%
4530958 621.1.1.3 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB 0.55 48.0 3.01e-01 100.0% 17.1%
4940433 309.1.2.2 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_bind_4 0.54 48.0 3.57e-01 100.0% 46.3%
5033602 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.54 38.0 3.26e-01 74.6% 70.5%
5051882 101.1.2.143 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.54 38.0 3.21e-01 74.6% 85.5%
147013 3227.1.1.1 ↗ alpha complex topology › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › PTS_EIIC 0.53 46.0 2.80e-01 100.0% 15.5%
3929962 3877.1.1.0 ↗ alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.52 45.0 3.03e-01 100.0% 25.5%
4618205 604.1.1.150 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28954 0.51 42.0 3.54e-01 100.0% 65.8%
3499766 3914.1.1.0 ↗ alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain 0.51 42.0 2.41e-01 100.0% 8.2%
3851570 5054.1.1.2 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.50 42.0 2.67e-01 100.0% 73.4%