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HNH-family_endonuclease

Euk-Vir

Marseillevirus_marseillevirus

HNH-family_endonuclease__YP_003407030__Marseillevirus_marseillevirus__694581

Identity

Accession:
YP_003407030 ↗
Protein ID:
HNH-family_endonuclease
Kingdom:
euk

Quality

74.8 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Marseillevirus_marseillevirus

TaxID: 694581

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 164-231
PDB
Domain cluster: rep: HNH-family_endonuclease__YP_009310317__Golden_Marseillevirus__1720526__D184-246
D2 high residues 299-388
PDB
Domain cluster: rep: ON911716.1__UUV45277.1__X__00019__D2-75
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 36.3 4.60e-09 42.2% 65.2%
D3 high residues 391-461
PDB
Domain cluster: rep: HNH-family_endonuclease__YP_009345378__Noumeavirus__1955558__D401-468
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00847.27 best AP2 40.6 3.60e-10 71.8% 87.0%
D4 medium residues 18-61
PDB
Domain cluster: rep: putative_HNH-family_endonuclease__YP_009094766__Melbournevirus__1560514__D15-66
D5 medium residues 68-146
PDB
Domain cluster: rep: putative_HNH-family_endonuclease__YP_009094766__Melbournevirus__1560514__D67-127
D6 medium residues 249-292
PDB