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HN

Euk-Vir

Antarctic_penguin_virus_B

HN__YP_009508515__Antarctic_penguin_virus_B__2006073

Identity

Accession:
YP_009508515 ↗
Protein ID:
HN
Kingdom:
euk

Quality

80.7 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Paramyxoviridae› Orthoavulavirus› Antarctic_penguin_virus_B

TaxID: 2006073

Cluster

View cluster (61 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 181-488_543-587
PDB
Domain cluster: rep: hemagglutinin-neuraminidase_protein__YP_009508497__Avian_paramyxovirus_14__1928005__D254-485
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 339.7 3.90e-101 87.8% 55.4%
PF00423.27 HN 38.0 1.10e-09 13.0% 7.7%
D2 medium residues 489-542
PDB
Domain cluster: rep: hemagglutinin-neuraminidase_protein__YP_009508503__Avian_paramyxovirus_UPO216__2006690__D471-524
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e8uA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.99 94.0 5.34e-01 100.0% 12.1%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.93 80.0 4.63e-01 100.0% 12.1%
1z4vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.87 80.0 4.60e-01 100.0% 13.1%
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.82 69.0 4.04e-01 100.0% 12.1%
1so7A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.64 54.0 3.33e-01 100.0% 15.5%
3es4A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 43.0 3.43e-01 75.9% 75.9%
4agrB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 51.0 3.84e-01 100.0% 36.1%
3wa2X01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 50.0 4.31e-01 92.6% 62.1%
6b9tF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 43.0 3.46e-01 75.9% 85.3%
3d4eA02 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.60 50.0 4.47e-01 96.3% 100.0%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.60 49.0 4.22e-01 96.3% 88.0%
2w38A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.60 51.0 3.21e-01 100.0% 24.8%
6e20A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 51.0 3.86e-01 100.0% 41.7%
5ay6A01 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.58 46.0 3.32e-01 92.6% 32.7%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 3.80e-01 100.0% 41.0%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.57 45.0 3.44e-01 92.6% 35.0%
3wucB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 3.76e-01 100.0% 40.1%
5tf2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 42.0 2.64e-01 100.0% 13.3%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 41.0 4.03e-01 88.9% 71.0%
4k3yC00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 46.0 2.85e-01 100.0% 14.4%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 3.49e-01 100.0% 35.1%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 33.0 3.26e-01 81.5% 51.7%
3nppA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.56 41.0 3.53e-01 79.6% 63.2%
5cr4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 40.0 2.75e-01 79.6% 71.0%
4be3A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 2.87e-01 100.0% 29.5%
3hxlA02 2.60.40.4290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 41.0 3.57e-01 88.9% 55.6%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 38.0 3.61e-01 77.8% 100.0%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 40.0 2.95e-01 90.7% 77.7%
2arhA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 43.0 3.21e-01 98.1% 41.1%
3lmlA03 2.60.40.4290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 3.53e-01 88.9% 60.0%
7ne4A01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.52 40.0 2.52e-01 90.7% 14.6%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 40.0 2.93e-01 87.0% 42.7%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.51 41.0 3.14e-01 92.6% 46.8%
2w5nA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 42.0 2.69e-01 100.0% 34.2%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 37.0 3.25e-01 83.3% 50.0%
2yweA05 3.30.70.2570 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation factor 4, C-terminal domain 0.50 37.0 3.53e-01 83.3% 98.5%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
152420 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.96 91.0 5.13e-01 100.0% 11.1%
2833528 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.94 82.0 4.64e-01 100.0% 10.3%
4889672 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.92 79.0 4.55e-01 100.0% 11.5%
1519176 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.82 69.0 4.03e-01 100.0% 12.0%
4982545 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.68 59.0 5.13e-01 100.0% 72.6%
3501354 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.64 52.0 3.40e-01 92.6% 23.9%
4138644 5.1.3.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.63 50.0 3.28e-01 92.6% 20.0%
3840641 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.63 55.0 3.77e-01 100.0% 27.7%
4964235 3435.1.1.0 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.62 48.0 3.16e-01 88.9% 30.0%
3997948 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.61 49.0 3.57e-01 100.0% 31.6%
5041726 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 51.0 4.51e-01 100.0% 65.9%
3749122 5.1.3.176 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › APEH_N 0.59 50.0 3.05e-01 100.0% 13.5%
3736616 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.58 48.0 3.04e-01 98.1% 29.1%
3242315 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.58 44.0 4.47e-01 94.4% 85.5%
3920675 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.58 43.0 3.95e-01 90.7% 60.0%
1544904 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.57 50.0 3.76e-01 100.0% 40.1%
3241305 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.57 42.0 3.23e-01 88.9% 32.1%
134234 809.1.1.2 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › BLIP 0.57 45.0 4.09e-01 96.3% 100.0%
3508738 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.56 49.0 3.67e-01 100.0% 41.4%
3483808 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.56 44.0 4.13e-01 92.6% 70.0%
3415353 5.1.4.48 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS1 0.56 45.0 2.80e-01 94.4% 15.1%
3272078 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 43.0 2.89e-01 94.4% 19.6%
3709212 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.56 47.0 2.65e-01 100.0% 7.8%
3288281 881.1.1.15 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3558 0.55 42.0 3.28e-01 90.7% 76.1%
3257790 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.55 43.0 3.43e-01 92.6% 44.8%
3544903 5.1.4.13 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP 0.55 45.0 2.76e-01 100.0% 23.1%
3866695 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.55 40.0 2.99e-01 94.4% 28.4%
3258445 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.55 39.0 4.12e-01 92.6% 95.6%
3266526 234.3.1.0 ↗ a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain 0.55 39.0 3.00e-01 92.6% 30.9%
3622366 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.54 43.0 4.43e-01 94.4% 100.0%
3390746 5.1.3.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.54 43.0 3.05e-01 92.6% 34.6%
3711463 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.53 42.0 2.57e-01 100.0% 12.8%
3664013 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.52 40.0 2.65e-01 92.6% 18.0%
3364063 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.52 39.0 3.07e-01 100.0% 34.3%
3672898 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.51 35.0 2.88e-01 87.0% 33.6%
3954760 1001.1.1.1 ↗ a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 0.51 37.0 3.65e-01 83.3% 73.3%
4933684 2484.4.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co 0.51 37.0 3.03e-01 83.3% 44.3%