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HOAR
Euk-VirPseudoplusia_includens_SNPV_IE
HOAR__YP_009116917__Pseudoplusia_includens_SNPV_IE__1592335
Identity
- Accession:
- YP_009116917 ↗
- Protein ID:
- HOAR
- Kingdom:
- euk
Quality
60.4
mean pLDDT
Taxonomy
TaxID: 1592335
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-112_182-212
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.63 | 39.0 | 3.81e-01 | 99.3% | 56.5% |
| 3rkoG00 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 34.0 | 4.02e-01 | 86.0% | 77.0% |
| 2z16B01 | 1.20.91.10 | Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Influenza matrix M1, N-terminal subdomain 1 | 0.61 | 30.0 | 3.94e-01 | 100.0% | 85.9% |
| 7zmgL01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 31.0 | 3.98e-01 | 76.9% | 87.5% |
| 5lnkJ01 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.57 | 33.0 | 3.14e-01 | 90.9% | 46.7% |
| 2wb7A03 | 1.20.120.870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain | 0.56 | 39.0 | 4.01e-01 | 93.0% | 74.3% |
| 2ijqA00 | 1.10.3450.10 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like | 0.56 | 32.0 | 3.21e-01 | 100.0% | 53.1% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.53 | 37.0 | 3.51e-01 | 88.1% | 59.0% |
| 5ziyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.52 | 37.0 | 3.39e-01 | 73.4% | 88.1% |
| 3dyjA01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.51 | 42.0 | 4.06e-01 | 88.1% | 99.4% |
| 3omzA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 28.0 | 3.18e-01 | 81.1% | 69.9% |
| 3vhlA02 | 1.20.58.740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C | 0.50 | 36.0 | 3.86e-01 | 87.4% | 86.7% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4963258 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.68 | 40.0 | 5.05e-01 | 92.3% | 97.6% |
| 4965834 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.67 | 39.0 | 4.98e-01 | 91.6% | 96.5% |
| 3411108 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.65 | 43.0 | 4.49e-01 | 93.0% | 71.1% |
| 5025118 | 3843.1.1.1 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 | 0.62 | 33.0 | 3.91e-01 | 76.9% | 74.0% |
| 3416038 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.61 | 41.0 | 4.32e-01 | 93.0% | 75.4% |
| 5034580 | 3843.1.1.4 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › PhaG_MnhG_YufB | 0.60 | 33.0 | 3.84e-01 | 77.6% | 75.0% |
| 3520096 | 601.1.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin | 0.59 | 37.0 | 3.89e-01 | 96.5% | 68.5% |
| 2526324 | 7086.1.1.0 ↗ | 0.58 | 33.0 | 4.08e-01 | 72.0% | 86.3% | |
| 4028997 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 23.0 | 2.88e-01 | 71.3% | 60.0% |
| 4999453 | 3579.1.1.1 ↗ | extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › Oxidored_q3 | 0.55 | 31.0 | 2.95e-01 | 86.7% | 44.5% |
| 3607447 | 633.6.1.2 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX | 0.54 | 40.0 | 3.80e-01 | 76.9% | 87.1% |
| 3281875 | 191.1.1.48 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46 | 0.53 | 40.0 | 4.15e-01 | 98.6% | 86.2% |
| 5044466 | 4266.1.1.0 ↗ | alpha bundles › Hyaluronidase domain-like › Hyaluronidase post-catalytic domain-like › Hyaluronidase post-catalytic domain-like | 0.53 | 48.0 | 4.45e-01 | 100.0% | 78.9% |
| 3838519 | 3579.1.1.1 ↗ | extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › Oxidored_q3 | 0.52 | 29.0 | 2.79e-01 | 85.3% | 42.9% |
| 3843913 | 633.6.1.2 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX | 0.52 | 42.0 | 3.90e-01 | 86.7% | 78.4% |
| 2667758 | 5069.1.3.4 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › CybS | 0.51 | 33.0 | 3.67e-01 | 86.0% | 79.0% |
| 4473372 | 150.8.1.5 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › EspA_EspE | 0.51 | 41.0 | 3.61e-01 | 85.3% | 88.1% |
| 3596209 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.51 | 38.0 | 3.69e-01 | 79.0% | 78.8% |
| 2578415 | 3579.1.1.1 ↗ | extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › Oxidored_q3 | 0.50 | 30.0 | 2.88e-01 | 90.9% | 48.2% |
| 3736148 | 633.6.1.2 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX | 0.50 | 41.0 | 3.65e-01 | 86.0% | 70.0% |
D2
medium
residues 113-181
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.77 | 54.0 | 4.48e-01 | 73.9% | 54.5% |
| 3zdmB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.77 | 52.0 | 6.00e-01 | 71.0% | 100.0% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.74 | 54.0 | 5.03e-01 | 76.8% | 88.2% |
| 2gsqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.74 | 51.0 | 4.42e-01 | 72.5% | 67.6% |
| 1iq0A03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.73 | 52.0 | 4.34e-01 | 73.9% | 64.7% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.73 | 56.0 | 4.72e-01 | 82.6% | 80.9% |
| 1vcsA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.72 | 49.0 | 4.30e-01 | 71.0% | 71.6% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.72 | 64.0 | 6.13e-01 | 100.0% | 92.4% |
| 2i9cA01 | 1.25.40.70 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) | 0.71 | 51.0 | 4.34e-01 | 75.4% | 54.1% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 49.0 | 3.56e-01 | 72.5% | 46.3% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 47.0 | 4.50e-01 | 71.0% | 65.1% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.68 | 50.0 | 4.17e-01 | 79.7% | 87.2% |
| 2vxxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.67 | 55.0 | 4.13e-01 | 91.3% | 54.7% |
| 3l0iA01 | 1.20.120.1520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.66 | 52.0 | 3.88e-01 | 87.0% | 96.6% |
| 4cybD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.65 | 54.0 | 4.14e-01 | 94.2% | 56.1% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.65 | 44.0 | 4.92e-01 | 72.5% | 94.2% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 48.0 | 4.13e-01 | 81.2% | 67.0% |
| 4ui9P01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 45.0 | 2.99e-01 | 75.4% | 39.7% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 51.0 | 3.90e-01 | 94.2% | 56.6% |
| 3qwwA03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 41.0 | 3.06e-01 | 71.0% | 47.6% |
| 3r2kA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 47.0 | 3.62e-01 | 87.0% | 61.7% |
| 3caxA01 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.58 | 49.0 | 3.51e-01 | 95.7% | 56.2% |
| 1z19A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.53 | 42.0 | 3.74e-01 | 87.0% | 85.0% |
| 4hbdA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.53 | 42.0 | 2.97e-01 | 91.3% | 26.5% |
| 1irxA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 43.0 | 3.95e-01 | 94.2% | 90.3% |
| 3ne5B04 | 6.10.140.730 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 36.0 | 3.96e-01 | 73.9% | 98.0% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.51 | 41.0 | 3.53e-01 | 94.2% | 75.0% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3596608 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.78 | 55.0 | 5.13e-01 | 73.9% | 75.3% |
| 3965562 | 601.33.1.22 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › HemX | 0.78 | 54.0 | 4.81e-01 | 72.5% | 90.5% |
| 4572664 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.75 | 53.0 | 5.31e-01 | 73.9% | 88.6% |
| 3576327 | 6067.1.1.1 ↗ | alpha arrays › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › SGTA_dimer | 0.72 | 65.0 | 6.31e-01 | 98.6% | 92.0% |
| 3718362 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 61.0 | 4.22e-01 | 95.7% | 72.3% |
| 3668286 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.69 | 47.0 | 4.73e-01 | 71.0% | 75.7% |
| 4672360 | 604.1.1.4 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SbsC_C | 0.68 | 51.0 | 4.79e-01 | 79.7% | 78.8% |
| 54712 | 601.24.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 0.68 | 48.0 | 4.32e-01 | 73.9% | 98.9% |
| 5027346 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.68 | 53.0 | 5.46e-01 | 84.1% | 89.2% |
| 3716217 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.67 | 50.0 | 4.58e-01 | 79.7% | 65.6% |
| 3308803 | 3718.1.1.13 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › KNOX1, KNOX2 | 0.66 | 55.0 | 5.10e-01 | 88.4% | 84.7% |
| 3738395 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.66 | 48.0 | 3.34e-01 | 78.3% | 52.8% |
| 4600223 | 616.1.1.33 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › UPF0262 | 0.64 | 45.0 | 3.61e-01 | 75.4% | 91.0% |
| 3245826 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.63 | 52.0 | 3.74e-01 | 92.8% | 64.3% |
| 3505390 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.62 | 45.0 | 3.52e-01 | 76.8% | 49.7% |
| 3794624 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 44.0 | 3.12e-01 | 75.4% | 47.6% |
| 4954547 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.58 | 48.0 | 3.51e-01 | 92.8% | 78.0% |
| 3652854 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.56 | 44.0 | 3.29e-01 | 87.0% | 62.8% |
| 3596169 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.54 | 45.0 | 3.48e-01 | 92.8% | 58.1% |
| 3279143 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.54 | 47.0 | 3.79e-01 | 98.6% | 49.3% |
| 3785339 | 3294.1.1.1 ↗ | alpha complex topology › FAS type I helical domain › FAS type I helical domain › FAS type I helical domain › FAS_I_H | 0.54 | 47.0 | 2.97e-01 | 94.2% | 27.8% |
| 3498728 | 544.1.1.1 ↗ | alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Prp18 | 0.53 | 42.0 | 3.14e-01 | 94.2% | 32.2% |
D3
medium
residues 213-264
Domain cluster:
rep: HOAR__YP_010087005__Spodoptera_eridania_nucleopolyhedrovirus__2315721__D185-234