←Back to structures
HQ110084.1__ADX32457.1__X__00013
Bact-VirHQ110084.1__ADX32457.1__X__00013
Identity
- Accession:
- HQ110084 ↗
- Kingdom:
- phage
Quality
95.2
mean pLDDT
Taxonomy
TaxID: 947843
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-83
Domain cluster:
rep: OP131588.1__UZV40213.1__Acica_08__00008__D106-210
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00959.25 best | Phage_lysozyme | 70.5 | 2.20e-19 | 92.7% | 60.0% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hdeC00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.95 | 91.0 | 6.95e-01 | 100.0% | 50.0% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.94 | 90.0 | 7.12e-01 | 100.0% | 58.1% |
| 8b2sA01 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.93 | 88.0 | 6.91e-01 | 100.0% | 55.8% |
| 1xjuA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.92 | 87.0 | 6.81e-01 | 100.0% | 60.3% |
| 2anvA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.92 | 86.0 | 6.85e-01 | 100.0% | 55.5% |
| 8hp8A01 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.91 | 85.0 | 6.72e-01 | 100.0% | 54.2% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.66 | 52.0 | 4.72e-01 | 85.4% | 90.0% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.66 | 51.0 | 4.21e-01 | 84.1% | 67.5% |
| 2r31A02 | 1.10.3580.10 | Mainly Alpha › Orthogonal Bundle › ATP12-like fold › ATP12 ATPase | 0.64 | 57.0 | 4.53e-01 | 100.0% | 87.6% |
| 5u9nB00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.63 | 48.0 | 4.36e-01 | 85.4% | 93.3% |
| 5figA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 48.0 | 4.58e-01 | 84.1% | 97.0% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 47.0 | 4.43e-01 | 82.9% | 93.1% |
| 2h5nC00 | 1.10.3680.10 | Mainly Alpha › Orthogonal Bundle › TerB-like › TerB-like | 0.61 | 49.0 | 4.36e-01 | 89.0% | 85.5% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.61 | 46.0 | 4.26e-01 | 85.4% | 75.4% |
| 2qbyA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 44.0 | 4.12e-01 | 78.0% | 78.6% |
| 3craA02 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.60 | 34.0 | 2.94e-01 | 84.1% | 35.2% |
| 4mn0A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.59 | 45.0 | 3.57e-01 | 84.1% | 76.2% |
| 2guzB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.59 | 40.0 | 4.44e-01 | 81.7% | 89.2% |
| 1a7mA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.58 | 45.0 | 3.59e-01 | 85.4% | 52.8% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.58 | 44.0 | 3.68e-01 | 82.9% | 64.7% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.56 | 39.0 | 4.10e-01 | 84.1% | 82.4% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.55 | 40.0 | 3.93e-01 | 78.0% | 96.6% |
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.53 | 30.0 | 2.86e-01 | 85.4% | 43.1% |
| 4uobA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.53 | 44.0 | 3.93e-01 | 96.3% | 65.9% |
| 2x0cA01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.53 | 38.0 | 3.04e-01 | 76.8% | 90.4% |
| 3pyoY00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 35.0 | 3.98e-01 | 81.7% | 91.9% |
| 2qq8A03 | 1.10.472.80 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 | 0.52 | 40.0 | 3.36e-01 | 84.1% | 99.3% |
| 2i6xA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.50 | 38.0 | 4.05e-01 | 82.9% | 94.4% |
| 2is9A02 | 1.10.238.200 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Cullin, PONY binding domain | 0.50 | 42.0 | 4.16e-01 | 100.0% | 93.4% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3944610 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.98 | 96.0 | 7.32e-01 | 100.0% | 51.6% |
| 136932 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.96 | 92.0 | 7.00e-01 | 100.0% | 49.7% |
| 4834320 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.95 | 90.0 | 8.14e-01 | 100.0% | 81.1% |
| 2771202 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.94 | 90.0 | 6.94e-01 | 100.0% | 53.8% |
| 2488339 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.94 | 90.0 | 7.12e-01 | 100.0% | 58.1% |
| 7422 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.92 | 87.0 | 6.81e-01 | 100.0% | 60.3% |
| 159686 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.92 | 86.0 | 6.85e-01 | 100.0% | 55.5% |
| 3033455 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.91 | 85.0 | 6.61e-01 | 100.0% | 51.6% |
| 3949298 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.90 | 84.0 | 6.36e-01 | 100.0% | 51.4% |
| 3637269 | 235.1.1.6 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme | 0.82 | 76.0 | 7.23e-01 | 100.0% | 88.2% |
| 3806463 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.70 | 54.0 | 4.40e-01 | 82.9% | 76.8% |
| 3607681 | 633.10.1.15 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Transmemb_17 | 0.67 | 52.0 | 4.42e-01 | 84.1% | 80.0% |
| 4383079 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.66 | 51.0 | 4.17e-01 | 84.1% | 65.8% |
| 3853260 | 633.10.1.15 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Transmemb_17 | 0.64 | 49.0 | 4.22e-01 | 84.1% | 80.0% |
| 3928215 | 133.1.1.0 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) | 0.63 | 48.0 | 3.71e-01 | 82.9% | 79.5% |
| 3255340 | 223.2.1.21 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › AP-5_subunit_s1 | 0.60 | 43.0 | 3.29e-01 | 75.6% | 96.0% |
| 5022186 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.60 | 34.0 | 3.35e-01 | 84.1% | 51.1% |
| 4029967 | 633.1.1.0 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain | 0.59 | 45.0 | 4.13e-01 | 85.4% | 75.7% |
| 3646157 | 601.3.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt | 0.57 | 42.0 | 3.48e-01 | 81.7% | 98.2% |
| 4934638 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.56 | 46.0 | 3.07e-01 | 92.7% | 23.3% |
| 3614428 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.55 | 43.0 | 3.67e-01 | 85.4% | 52.6% |
| 3998584 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.54 | 41.0 | 3.64e-01 | 84.1% | 68.0% |
| 3176182 | 3881.1.1.1 ↗ | alpha bundles › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › DUF3819 | 0.54 | 40.0 | 3.06e-01 | 81.7% | 78.1% |
| 4940427 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.52 | 35.0 | 3.70e-01 | 93.9% | 76.0% |
| 4344857 | 650.1.1.2 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › Pam16 | 0.52 | 39.0 | 3.93e-01 | 80.5% | 88.2% |
| 4661496 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.50 | 41.0 | 2.55e-01 | 93.9% | 85.6% |