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HQ141411.1__ADW01333.1__X__00052

Bact-Vir

HQ141411.1__ADW01333.1__X__00052

Identity

Accession:
HQ141411 ↗
Kingdom:
phage

Quality

84.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-64
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.88 67.0 6.48e-01 100.0% 72.3%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.80 71.0 6.89e-01 100.0% 88.9%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 65.0 5.83e-01 100.0% 66.3%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 68.0 6.34e-01 100.0% 83.3%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 55.0 5.92e-01 96.6% 100.0%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.72 66.0 4.78e-01 100.0% 50.0%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.71 59.0 4.98e-01 96.6% 100.0%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 63.0 5.41e-01 100.0% 63.0%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 57.0 5.55e-01 100.0% 82.5%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 62.0 5.77e-01 100.0% 79.2%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.69 54.0 5.73e-01 100.0% 98.0%
1whlA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.69 62.0 5.25e-01 100.0% 80.0%
2wbfX00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.69 60.0 3.90e-01 100.0% 32.1%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.69 62.0 5.77e-01 100.0% 93.0%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 46.0 4.60e-01 100.0% 70.0%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 54.0 5.35e-01 100.0% 83.9%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 54.0 5.28e-01 100.0% 82.5%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.66 51.0 3.31e-01 84.5% 51.9%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.65 52.0 5.26e-01 94.8% 92.9%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 51.0 4.97e-01 100.0% 78.8%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 57.0 5.57e-01 100.0% 92.1%
6s6yD02 3.30.70.520 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 49.0 3.71e-01 86.2% 90.7%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.61 49.0 3.98e-01 94.8% 80.2%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 53.0 5.07e-01 100.0% 86.6%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.59 48.0 4.51e-01 91.4% 94.6%
5fl3A01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.59 46.0 3.90e-01 86.2% 80.0%
1nqzA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.59 47.0 3.51e-01 94.8% 79.5%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.58 45.0 3.35e-01 87.9% 79.4%
3b77A01 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.58 45.0 3.87e-01 89.7% 71.0%
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 42.0 4.08e-01 93.1% 70.1%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.57 41.0 4.29e-01 87.9% 92.3%
3u1wA02 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 49.0 4.72e-01 96.6% 86.4%
1rzuB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 42.0 2.86e-01 87.9% 29.0%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.56 41.0 4.24e-01 94.8% 85.7%
3i1aA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 47.0 3.92e-01 96.6% 87.4%
7xc8A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.55 46.0 3.93e-01 94.8% 81.4%
7xr9E01 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 40.0 2.89e-01 86.2% 92.4%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.53 39.0 3.96e-01 91.4% 84.7%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 36.0 3.35e-01 74.1% 91.1%
5bukB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 46.0 2.78e-01 100.0% 39.4%
2ivdB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 45.0 3.30e-01 100.0% 50.6%
2b2cA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.51 42.0 4.10e-01 93.1% 89.1%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 40.0 3.50e-01 89.7% 63.7%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3394215 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 66.0 5.45e-01 100.0% 53.0%
3550699 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.78 71.0 5.94e-01 100.0% 63.2%
5051313 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 64.0 6.19e-01 100.0% 80.0%
4345080 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.75 62.0 5.96e-01 100.0% 80.0%
5029166 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 67.0 6.18e-01 100.0% 87.8%
4238204 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.73 53.0 4.38e-01 77.6% 77.1%
3410370 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 66.0 6.17e-01 100.0% 82.9%
4261760 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.73 67.0 5.56e-01 100.0% 72.6%
4028885 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.72 59.0 5.69e-01 100.0% 80.0%
3059317 4.1.1.116 beta barrels › SH3 › SH3 › SH3 › SH3_14 0.72 61.0 5.05e-01 100.0% 93.8%
3599172 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.64e-01 100.0% 80.0%
4040055 4.26.1.1 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 0.71 55.0 5.52e-01 93.1% 84.5%
4101580 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.70 57.0 5.55e-01 100.0% 80.0%
3608236 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.70 57.0 5.53e-01 100.0% 80.0%
3416672 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 63.0 5.21e-01 100.0% 58.0%
4284764 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.70 57.0 5.48e-01 100.0% 80.0%
3347795 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.69 62.0 5.52e-01 100.0% 71.2%
4041586 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.69 56.0 5.45e-01 100.0% 80.0%
3967986 4.7.1.2 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.69 62.0 5.56e-01 100.0% 73.8%
4292289 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.69 56.0 5.39e-01 100.0% 80.0%
4213539 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.69 56.0 5.39e-01 100.0% 80.0%
3770802 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.69 59.0 5.01e-01 100.0% 77.2%
4674170 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.68 61.0 4.81e-01 100.0% 53.3%
4037383 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.68 56.0 5.40e-01 100.0% 80.0%
4051625 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.68 55.0 5.36e-01 100.0% 80.0%
3441143 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.68 60.0 5.01e-01 100.0% 57.0%
3306779 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.68 55.0 5.34e-01 100.0% 80.0%
4201878 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.67 55.0 5.29e-01 100.0% 80.0%
4104219 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.67 55.0 5.32e-01 100.0% 81.5%
4618633 4.26.1.1 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 0.67 54.0 5.47e-01 94.8% 89.8%
3265170 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.67 54.0 5.20e-01 100.0% 80.0%
4158157 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.67 54.0 5.25e-01 100.0% 80.0%
4038269 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.66 53.0 5.12e-01 100.0% 80.0%
4950462 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.66 50.0 5.01e-01 93.1% 80.0%
4135259 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.66 53.0 5.17e-01 100.0% 81.5%
3597248 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 50.0 4.38e-01 100.0% 54.7%
3707929 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 50.0 3.76e-01 100.0% 32.5%
4982529 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 45.0 4.72e-01 91.4% 90.0%
3848483 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.63 54.0 4.63e-01 100.0% 98.0%
3387410 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 51.0 4.15e-01 91.4% 83.5%
5061113 375.1.1.299 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.63 49.0 5.05e-01 94.8% 90.9%
5032461 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 54.0 5.20e-01 100.0% 87.7%
3933561 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 43.0 3.60e-01 93.1% 41.9%
3738581 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.61 47.0 3.00e-01 84.5% 51.0%
4393617 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.60 46.0 3.61e-01 84.5% 91.5%
4968081 375.1.1.299 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.60 48.0 4.89e-01 94.8% 90.9%
3466470 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 48.0 3.84e-01 94.8% 50.8%
5023617 4111.1.1.2 a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.59 53.0 4.02e-01 100.0% 44.4%
3614906 4.26.1.8 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Saf4_Yju2 0.59 49.0 4.71e-01 96.6% 98.6%
5063041 4111.1.1.2 a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.59 52.0 4.05e-01 100.0% 51.2%
167841 4.26.1.1 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 0.58 46.0 4.66e-01 96.6% 90.0%
4032340 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.58 49.0 4.12e-01 98.3% 94.3%
5062756 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 45.0 4.80e-01 93.1% 98.0%
3942998 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.57 48.0 4.53e-01 100.0% 80.0%
4965392 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.56 38.0 4.03e-01 72.4% 90.0%
3243980 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 44.0 2.83e-01 96.6% 26.3%
5008812 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.55 44.0 3.75e-01 94.8% 78.1%
4269457 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.54 42.0 3.34e-01 91.4% 90.3%
5017692 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 39.0 3.47e-01 89.7% 52.2%
3658860 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 40.0 2.74e-01 84.5% 21.8%
4240105 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.53 44.0 3.61e-01 96.6% 54.8%
4391625 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 40.0 3.35e-01 86.2% 94.5%
3942438 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 44.0 3.67e-01 98.3% 59.1%
4954798 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 43.0 3.46e-01 96.6% 52.0%
5030959 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.52 44.0 3.98e-01 96.6% 87.5%
3925321 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.52 40.0 2.58e-01 86.2% 44.3%
3781402 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.51 42.0 3.44e-01 96.6% 53.3%
3936843 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.51 40.0 2.59e-01 91.4% 36.8%
3593900 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 41.0 3.69e-01 91.4% 95.3%