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HQ225832.1__ADX42524.1__X__00004

Bact-Vir

HQ225832.1__ADX42524.1__X__00004

Identity

Accession:
HQ225832 ↗
Kingdom:
phage

Quality

91.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Tijeunavirus› Tetrasphaera_phage_TJE1

TaxID: 981335

Cluster

View cluster (52 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-84
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00436.32 best SSB 34.1 3.10e-08 100.0% 71.2%
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5gqoA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.94 76.0 6.81e-01 100.0% 63.9%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.93 88.0 7.62e-01 100.0% 72.4%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.91 86.0 7.35e-01 100.0% 67.6%
3ulpD00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.88 83.0 7.02e-01 100.0% 67.3%
4damC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.88 81.0 7.25e-01 100.0% 73.0%
3kojB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.87 77.0 7.15e-01 100.0% 77.8%
4dkaC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.82 60.0 5.66e-01 100.0% 65.1%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.81 69.0 6.39e-01 100.0% 73.6%
3j7aV00 2.40.50.1000 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.80 63.0 4.99e-01 100.0% 42.5%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 73.0 6.55e-01 100.0% 72.7%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 75.0 6.42e-01 100.0% 68.2%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 72.0 6.69e-01 100.0% 79.1%
1fguB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.79 67.0 5.87e-01 100.0% 63.8%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 71.0 6.31e-01 100.0% 70.9%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 61.0 5.34e-01 100.0% 56.9%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.68 47.0 3.83e-01 71.6% 62.4%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 59.0 5.09e-01 100.0% 80.9%
4wrnA02 2.60.40.3210 Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-N domain 0.66 45.0 3.97e-01 70.3% 94.3%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 51.0 3.38e-01 90.5% 92.5%
3nrfA00 2.60.40.4110 Mainly Beta › Sandwich › Immunoglobulin-like › Protein of unknown function DUF4354 0.61 51.0 4.67e-01 94.6% 98.0%
4p2iA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.59 50.0 4.35e-01 95.9% 98.3%
2iw3A05 2.40.50.990 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 44.0 3.89e-01 85.1% 55.0%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.58 41.0 2.99e-01 77.0% 75.7%
3bvxA05 2.60.40.1360 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 39.0 3.62e-01 70.3% 96.9%
3qeeB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 47.0 3.18e-01 91.9% 88.3%
1xweA01 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 50.0 4.09e-01 100.0% 54.5%
1xeuA02 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 39.0 3.77e-01 70.3% 96.4%
3c8iA00 2.40.410.10 Mainly Beta › Beta Barrel › putative membrane protein from Corynebacterium diphtheriae fold › putative membrane protein from Corynebacterium diphtheriae superfamily 0.56 48.0 4.08e-01 97.3% 96.9%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 50.0 3.04e-01 100.0% 27.4%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.56 44.0 2.78e-01 97.3% 16.2%
6lofA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.55 45.0 3.56e-01 93.2% 96.3%
2g16B00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.55 44.0 3.51e-01 91.9% 70.6%
7t4dA01 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.54 43.0 2.88e-01 86.5% 72.3%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.54 40.0 3.45e-01 93.2% 49.2%
3bf2A00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.54 44.0 3.72e-01 90.5% 77.6%
5ig0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 46.0 3.87e-01 97.3% 85.5%
1tzzB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 44.0 3.83e-01 93.2% 91.6%
5uj1A03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.53 44.0 3.37e-01 91.9% 84.8%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 47.0 3.71e-01 100.0% 62.3%
4o3vA00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.52 46.0 3.76e-01 98.6% 81.9%
2pwwA00 3.30.310.100 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YugN-like 0.52 37.0 3.26e-01 77.0% 74.8%
2n8xA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.52 42.0 3.37e-01 94.6% 60.2%
1xksA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 2.75e-01 100.0% 18.4%
3ttqA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 36.0 2.59e-01 75.7% 86.3%
3c7fA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 44.0 2.89e-01 100.0% 33.3%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.51 33.0 2.86e-01 93.2% 37.8%
2lxxA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.50 38.0 3.16e-01 86.5% 63.8%
3mjgB00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.50 35.0 3.25e-01 75.7% 74.3%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4238279 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.92 87.0 7.30e-01 100.0% 67.0%
4170378 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.91 86.0 7.22e-01 100.0% 65.2%
4025160 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.90 85.0 6.95e-01 100.0% 62.4%
3616890 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.90 84.0 7.07e-01 100.0% 63.5%
3924081 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.89 84.0 6.62e-01 100.0% 55.0%
294 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.89 84.0 6.52e-01 100.0% 53.1%
4032979 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.89 83.0 7.09e-01 100.0% 66.4%
4137219 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.89 80.0 7.07e-01 100.0% 70.0%
4047115 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.85 77.0 6.84e-01 100.0% 71.0%
3707760 2.1.1.225 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 0.85 79.0 6.62e-01 100.0% 63.3%
3473720 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.84 78.0 6.73e-01 100.0% 68.2%
3467519 2.1.1.229 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.83 78.0 6.81e-01 100.0% 72.4%
4068016 2.1.1.122 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.83 79.0 6.84e-01 100.0% 71.4%
4122961 2.1.1.122 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.82 78.0 6.89e-01 100.0% 74.0%
3783432 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.81 74.0 6.55e-01 100.0% 85.7%
317 2.1.1.122 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.80 75.0 6.42e-01 100.0% 68.2%
4264144 2.1.1.122 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.79 74.0 6.48e-01 100.0% 70.5%
3690510 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.79 72.0 6.24e-01 100.0% 66.4%
3595817 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.79 73.0 6.30e-01 100.0% 70.0%
3392389 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.79 69.0 5.79e-01 100.0% 58.3%
381191 2.1.1.122 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.78 71.0 6.31e-01 100.0% 70.9%
222748 2.1.1.122 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.78 73.0 6.75e-01 100.0% 82.2%
4327241 2.1.1.122 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.78 72.0 6.50e-01 100.0% 75.5%
3612689 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 66.0 5.73e-01 100.0% 71.8%
3604270 283.2.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.70 50.0 4.14e-01 74.3% 91.5%
5023738 11.1.1.1443 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29994 0.70 48.0 4.18e-01 70.3% 93.6%
3844481 11.1.1.640 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.66 45.0 3.88e-01 70.3% 88.2%
4883064 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.65 44.0 3.05e-01 70.3% 88.5%
3779283 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 43.0 3.73e-01 70.3% 87.8%
3927710 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.62 54.0 4.19e-01 97.3% 73.9%
5018714 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 44.0 4.82e-01 74.3% 98.3%
3885583 11.1.1.640 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.59 40.0 3.49e-01 70.3% 83.5%
5056319 177.1.1.0 ↗ alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease 0.59 41.0 3.19e-01 74.3% 67.6%
3931232 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 51.0 4.36e-01 100.0% 60.8%
3871082 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.58 50.0 4.04e-01 97.3% 80.0%
4951650 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.57 46.0 3.18e-01 89.2% 44.9%
None — 0.57 46.0 3.13e-01 90.5% 24.1%
3489971 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 45.0 3.88e-01 87.8% 62.5%
4955607 3435.1.1.0 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.56 47.0 3.43e-01 94.6% 79.1%
4000227 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 38.0 3.51e-01 70.3% 89.5%
3897871 11.1.1.640 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.55 39.0 3.47e-01 75.7% 86.7%
4943914 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.55 44.0 3.00e-01 91.9% 34.8%
5054294 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 44.0 4.07e-01 93.2% 82.0%
5036533 3435.1.1.0 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.54 46.0 3.37e-01 100.0% 91.6%
5056410 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.53 42.0 2.87e-01 90.5% 31.4%
3245811 304.112.1.0 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.53 42.0 3.28e-01 87.8% 50.0%
3679206 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.52 39.0 2.45e-01 81.1% 36.5%
3472421 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.52 42.0 3.49e-01 97.3% 50.0%
3601335 298.1.1.0 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.52 35.0 2.73e-01 70.3% 90.0%
3926482 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.52 40.0 2.75e-01 85.1% 29.7%
3925857 11.1.1.673 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_N 0.52 36.0 3.30e-01 74.3% 94.3%
1558628 243.1.1.15 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › T4BSS_DotI_IcmL 0.52 45.0 3.69e-01 98.6% 82.9%
3474593 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.52 37.0 2.98e-01 91.9% 36.3%
3486945 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 41.0 3.46e-01 97.3% 50.0%
3405436 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 39.0 3.55e-01 87.8% 71.3%
4983910 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 42.0 3.59e-01 95.9% 53.8%
3380753 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 41.0 3.94e-01 91.9% 77.8%
3416305 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.51 44.0 2.84e-01 100.0% 41.2%
4484391 230.1.1.5 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.50 41.0 3.50e-01 91.9% 84.8%
4444613 6086.1.1.0 ↗ extended segments › N-terminal domain of small heat shock protein Tsp36 › N-terminal domain of small heat shock protein Tsp36 › N-terminal domain of small heat shock protein Tsp36 0.50 40.0 2.74e-01 95.9% 22.8%