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HQ225832.1__ADX42529.1__X__00009
Bact-VirHQ225832.1__ADX42529.1__X__00009
Identity
- Accession:
- HQ225832 ↗
- Kingdom:
- phage
Quality
90.4
mean pLDDT
Taxonomy
TaxID: 981335
Cluster
View cluster (41 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-87
Domain cluster:
representative
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xmeF00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.92 | 84.0 | 5.95e-01 | 100.0% | 36.5% |
| 2qkxA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.90 | 84.0 | 5.78e-01 | 100.0% | 35.3% |
| 2pa4A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.88 | 82.0 | 5.37e-01 | 100.0% | 35.0% |
| 6pd2A01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.88 | 80.0 | 5.49e-01 | 100.0% | 31.8% |
| 4jd0A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.82 | 75.0 | 5.21e-01 | 100.0% | 32.7% |
| 2yc3A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.82 | 76.0 | 5.37e-01 | 100.0% | 36.1% |
| 6q2eA01 | 3.40.50.11840 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Diphthamide synthesis DPH1/DPH2 domain 1 | 0.69 | 53.0 | 5.22e-01 | 84.8% | 95.4% |
| 3obwA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.68 | 58.0 | 5.12e-01 | 94.9% | 92.4% |
| 5kolD00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.68 | 57.0 | 4.47e-01 | 94.9% | 75.0% |
| 3bl4A02 | 3.40.970.30 | Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease HI; Chain A › yp_829618.1 like domains | 0.68 | 41.0 | 4.87e-01 | 72.2% | 100.0% |
| 3lzdA01 | 3.40.50.11840 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Diphthamide synthesis DPH1/DPH2 domain 1 | 0.67 | 54.0 | 5.10e-01 | 87.3% | 87.4% |
| 3dwgA01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 56.0 | 4.25e-01 | 93.7% | 82.7% |
| 5x4kA01 | 3.90.1640.30 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › | 0.67 | 55.0 | 4.18e-01 | 93.7% | 38.1% |
| 5b55A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 55.0 | 4.24e-01 | 93.7% | 83.7% |
| 1fuyB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 54.0 | 4.29e-01 | 91.1% | 63.4% |
| 7yosA01 | 3.90.1640.30 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › | 0.65 | 55.0 | 4.16e-01 | 93.7% | 39.3% |
| 2ynmD01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.65 | 53.0 | 4.38e-01 | 91.1% | 75.5% |
| 2zskA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 51.0 | 4.66e-01 | 87.3% | 96.4% |
| 5ybwA01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 54.0 | 3.96e-01 | 96.2% | 88.3% |
| 4isyA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.64 | 54.0 | 3.89e-01 | 96.2% | 42.9% |
| 2wjwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 54.0 | 4.27e-01 | 96.2% | 46.0% |
| 4impA02 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 53.0 | 3.92e-01 | 93.7% | 46.4% |
| 4djaA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.63 | 56.0 | 4.42e-01 | 100.0% | 55.2% |
| 3eagA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 44.0 | 4.23e-01 | 100.0% | 63.4% |
| 1j5xA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.63 | 55.0 | 4.47e-01 | 98.7% | 70.0% |
| 7kx9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 52.0 | 4.22e-01 | 93.7% | 50.0% |
| 5ereA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 52.0 | 4.38e-01 | 96.2% | 66.4% |
| 1evlA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.61 | 42.0 | 3.77e-01 | 72.2% | 69.6% |
| 3lwsA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.61 | 49.0 | 3.54e-01 | 92.4% | 41.4% |
| 4qysA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 47.0 | 4.43e-01 | 100.0% | 68.3% |
| 3i09A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 52.0 | 4.49e-01 | 100.0% | 76.5% |
| 3mw8A01 | 3.40.50.10090 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 48.0 | 4.29e-01 | 89.9% | 94.0% |
| 2prsA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.60 | 50.0 | 4.53e-01 | 96.2% | 92.1% |
| 3od1A02 | 3.40.50.12590 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 38.0 | 4.20e-01 | 70.9% | 84.7% |
| 5l3qA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 50.0 | 3.84e-01 | 100.0% | 38.3% |
| 3pdiA02 | 3.40.50.12380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase MoFe cofactor biosynthesis protein NifE, C-terminal | 0.59 | 49.0 | 3.43e-01 | 93.7% | 71.4% |
| 1vw3D00 | 3.40.1370.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L4; Chain: A; › Ribosomal protein L4/L1 | 0.59 | 45.0 | 3.28e-01 | 100.0% | 27.6% |
| 5e7qA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.59 | 44.0 | 2.88e-01 | 83.5% | 83.1% |
| 5mp7A02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 48.0 | 4.11e-01 | 93.7% | 66.2% |
| 1vchD00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 48.0 | 3.86e-01 | 94.9% | 83.2% |
| 2q5iA03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.59 | 40.0 | 3.53e-01 | 70.9% | 67.8% |
| 3cgbA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 51.0 | 4.17e-01 | 98.7% | 81.9% |
| 3mebA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 46.0 | 3.27e-01 | 92.4% | 27.5% |
| 5buqA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.57 | 45.0 | 2.95e-01 | 88.6% | 22.8% |
| 4x9tA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 46.0 | 4.02e-01 | 88.6% | 61.2% |
| 2v3aA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 49.0 | 4.17e-01 | 100.0% | 91.1% |
| 1kpgD00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 48.0 | 3.37e-01 | 100.0% | 53.4% |
| 5iaiA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 41.0 | 3.14e-01 | 78.5% | 68.8% |
| 3vasA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 47.0 | 3.31e-01 | 97.5% | 84.8% |
| 2gerA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 45.0 | 3.57e-01 | 92.4% | 45.9% |
| 1ewqA02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.55 | 43.0 | 3.92e-01 | 91.1% | 78.8% |
| 3ju3A00 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 42.0 | 3.81e-01 | 86.1% | 100.0% |
| 1qguA03 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.55 | 47.0 | 4.23e-01 | 100.0% | 82.5% |
| 3outA01 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 47.0 | 3.87e-01 | 100.0% | 67.7% |
| 1dmgA00 | 3.40.1370.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L4; Chain: A; › Ribosomal protein L4/L1 | 0.54 | 47.0 | 3.70e-01 | 98.7% | 48.3% |
| 2dgdA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 44.0 | 3.88e-01 | 98.7% | 98.4% |
| 4c0rA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 42.0 | 3.87e-01 | 91.1% | 67.6% |
| 3vpbA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 37.0 | 3.42e-01 | 74.7% | 71.3% |
| 3ooyA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.52 | 43.0 | 3.09e-01 | 100.0% | 28.8% |
| 1gcuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 42.0 | 3.64e-01 | 97.5% | 88.9% |
| 3kksB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 43.0 | 3.57e-01 | 98.7% | 92.8% |
| 2duwA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 40.0 | 3.43e-01 | 88.6% | 83.2% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4962466 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.94 | 89.0 | 6.08e-01 | 100.0% | 33.9% |
| None | — | 0.92 | 87.0 | 5.85e-01 | 100.0% | 31.4% | |
| 5036471 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.90 | 85.0 | 5.83e-01 | 100.0% | 33.6% |
| 4463729 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.89 | 83.0 | 5.67e-01 | 100.0% | 32.1% |
| 5050619 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.89 | 83.0 | 5.68e-01 | 100.0% | 33.2% |
| 4932963 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.88 | 82.0 | 5.58e-01 | 100.0% | 32.0% |
| 4998130 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.88 | 82.0 | 5.66e-01 | 100.0% | 33.6% |
| 5040409 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.88 | 82.0 | 5.52e-01 | 100.0% | 31.5% |
| 3969230 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.87 | 79.0 | 5.55e-01 | 100.0% | 34.5% |
| 5082077 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.87 | 79.0 | 5.35e-01 | 100.0% | 29.6% |
| 4948384 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.87 | 73.0 | 5.36e-01 | 88.6% | 37.4% |
| 5013762 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.86 | 80.0 | 5.52e-01 | 100.0% | 33.6% |
| 4948258 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.85 | 72.0 | 5.15e-01 | 88.6% | 34.5% |
| 4984515 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.85 | 79.0 | 5.54e-01 | 100.0% | 36.9% |
| 5043935 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.85 | 77.0 | 5.49e-01 | 100.0% | 35.5% |
| 4640288 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.85 | 78.0 | 5.32e-01 | 100.0% | 31.2% |
| 4992606 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.85 | 78.0 | 5.50e-01 | 100.0% | 35.1% |
| 3713051 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.84 | 77.0 | 5.05e-01 | 100.0% | 30.0% |
| 3595861 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.83 | 76.0 | 4.82e-01 | 100.0% | 24.6% |
| 4954544 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.71 | 59.0 | 4.44e-01 | 91.1% | 81.1% |
| 4958713 | 7518.1.1.0 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like | 0.69 | 60.0 | 4.74e-01 | 98.7% | 80.0% |
| 3288103 | 2005.1.1.72 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF30635 | 0.68 | 58.0 | 4.96e-01 | 100.0% | 57.0% |
| 4587568 | 2007.1.7.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH_2 | 0.68 | 57.0 | 4.58e-01 | 93.7% | 61.3% |
| 4048026 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.67 | 46.0 | 4.31e-01 | 70.9% | 80.0% |
| 5066611 | 2007.1.16.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn | 0.66 | 57.0 | 5.35e-01 | 94.9% | 89.5% |
| 3768565 | 2007.1.6.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain | 0.66 | 45.0 | 3.80e-01 | 72.2% | 42.1% |
| 4947480 | 2006.1.5.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl | 0.65 | 56.0 | 4.02e-01 | 100.0% | 82.4% |
| 3280738 | 2007.1.4.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain | 0.65 | 53.0 | 5.04e-01 | 91.1% | 86.3% |
| 5001124 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.65 | 57.0 | 4.36e-01 | 96.2% | 77.1% |
| 3539914 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.65 | 54.0 | 4.20e-01 | 94.9% | 56.2% |
| 3631895 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.65 | 53.0 | 3.73e-01 | 92.4% | 38.9% |
| 3823490 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.64 | 55.0 | 4.20e-01 | 96.2% | 54.6% |
| 3485118 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.63 | 44.0 | 3.57e-01 | 73.4% | 61.9% |
| 4671615 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 43.0 | 4.00e-01 | 72.2% | 74.3% |
| 4472981 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.63 | 43.0 | 4.00e-01 | 70.9% | 74.7% |
| 3487184 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.63 | 56.0 | 4.41e-01 | 100.0% | 59.4% |
| 4977160 | 7513.1.1.1 ↗ | a/b three-layered sandwiches › CofD-like › CofD-like › CofD-like › CofD | 0.63 | 53.0 | 3.60e-01 | 96.2% | 27.7% |
| 4252844 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.62 | 42.0 | 3.90e-01 | 72.2% | 71.4% |
| 4973363 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.61 | 42.0 | 3.73e-01 | 70.9% | 67.0% |
| 3941532 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.61 | 52.0 | 4.46e-01 | 96.2% | 76.9% |
| 3327526 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.61 | 44.0 | 3.30e-01 | 77.2% | 82.8% |
| 5028374 | 2007.1.16.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn | 0.61 | 53.0 | 4.96e-01 | 98.7% | 85.0% |
| 4600127 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.61 | 42.0 | 3.74e-01 | 72.2% | 66.1% |
| 3509845 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.61 | 51.0 | 3.63e-01 | 96.2% | 38.1% |
| 4956540 | 7597.1.1.0 ↗ | a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain | 0.61 | 50.0 | 4.93e-01 | 93.7% | 84.7% |
| 3590516 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.61 | 41.0 | 3.71e-01 | 70.9% | 70.0% |
| 3227093 | 2003.1.7.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › IF-2B | 0.60 | 49.0 | 3.75e-01 | 88.6% | 52.7% |
| 3596540 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.60 | 41.0 | 3.81e-01 | 72.2% | 74.3% |
| 5024528 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.60 | 52.0 | 3.60e-01 | 98.7% | 70.5% |
| 3815181 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.59 | 51.0 | 4.39e-01 | 100.0% | 83.7% |
| 4976044 | 2002.1.1.77 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RNase_P_p30 | 0.59 | 53.0 | 3.79e-01 | 100.0% | 85.2% |
| 5034137 | 7590.1.1.1 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Peptidase_M29 | 0.59 | 51.0 | 3.98e-01 | 96.2% | 77.6% |
| 4412868 | 2005.1.1.21 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Pantoate_ligase | 0.59 | 51.0 | 3.94e-01 | 100.0% | 64.2% |
| 5000537 | 2003.1.5.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GCD14 | 0.59 | 50.0 | 3.87e-01 | 100.0% | 90.8% |
| 3951194 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.59 | 48.0 | 3.94e-01 | 93.7% | 63.9% |
| 3260693 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.58 | 49.0 | 3.95e-01 | 97.5% | 81.2% |
| 5047713 | 7590.1.1.1 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Peptidase_M29 | 0.58 | 50.0 | 4.01e-01 | 96.2% | 78.1% |
| 3807960 | 7573.1.1.9 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran, Pribosyl_synth | 0.58 | 48.0 | 3.83e-01 | 93.7% | 58.3% |
| 4943318 | 2004.1.1.90 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CobA_CobO_BtuR | 0.58 | 49.0 | 4.05e-01 | 98.7% | 78.7% |
| 5018108 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.57 | 48.0 | 3.90e-01 | 100.0% | 60.0% |
| 5023021 | 7550.1.1.1 ↗ | a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase | 0.57 | 48.0 | 4.24e-01 | 98.7% | 65.6% |
| 4978057 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.57 | 47.0 | 3.81e-01 | 93.7% | 65.6% |
| 3385729 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.57 | 45.0 | 3.83e-01 | 88.6% | 66.7% |
| 3954157 | 7573.1.1.9 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran, Pribosyl_synth | 0.56 | 46.0 | 3.74e-01 | 96.2% | 57.6% |
| 3352228 | 2003.1.5.21 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CMAS | 0.56 | 46.0 | 3.34e-01 | 94.9% | 98.8% |
| 4444716 | 7502.1.1.6 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HisZ_C | 0.55 | 33.0 | 3.63e-01 | 70.9% | 76.7% |
| 5003521 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 46.0 | 4.30e-01 | 100.0% | 96.2% |
| 5005835 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.54 | 45.0 | 3.89e-01 | 97.5% | 87.4% |
| 4995585 | 2007.1.14.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like | 0.54 | 42.0 | 3.87e-01 | 93.7% | 77.5% |
| 5051805 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.53 | 45.0 | 3.67e-01 | 97.5% | 78.8% |
| 3957458 | 7512.1.1.32 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 | 0.50 | 44.0 | 3.29e-01 | 100.0% | 61.1% |
D2
medium
residues 88-215
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ecmA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.76 | 71.0 | 5.62e-01 | 100.0% | 54.7% |
| 2cu2A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.72 | 65.0 | 4.75e-01 | 98.4% | 51.0% |
| 2y6pB00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.71 | 66.0 | 5.35e-01 | 100.0% | 62.2% |
| 4evwA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.71 | 64.0 | 5.13e-01 | 96.9% | 55.6% |
| 3tqdA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.71 | 65.0 | 5.19e-01 | 98.4% | 63.0% |
| 2wawA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.70 | 52.0 | 4.48e-01 | 100.0% | 50.0% |
| 4mybA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.62 | 57.0 | 4.67e-01 | 97.7% | 58.1% |
| 4fixA01 | 3.90.550.60 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.60 | 50.0 | 3.54e-01 | 91.4% | 37.2% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4977700 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.77 | 72.0 | 5.68e-01 | 100.0% | 53.5% |
| 5037987 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.76 | 70.0 | 5.64e-01 | 100.0% | 54.3% |
| 5057687 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.75 | 70.0 | 5.43e-01 | 100.0% | 50.9% |
| 4968421 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.75 | 71.0 | 5.50e-01 | 100.0% | 53.3% |
| 5028069 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.75 | 71.0 | 5.59e-01 | 100.0% | 55.9% |
| 4257872 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.75 | 69.0 | 5.59e-01 | 100.0% | 57.0% |
| 5050619 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.74 | 69.0 | 5.49e-01 | 100.0% | 55.3% |
| 4938073 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.74 | 69.0 | 5.48e-01 | 99.2% | 57.9% |
| 4998130 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.74 | 69.0 | 5.52e-01 | 100.0% | 57.0% |
| 4960833 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.73 | 69.0 | 5.40e-01 | 100.0% | 55.6% |
| 4987485 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.73 | 68.0 | 5.45e-01 | 98.4% | 57.4% |
| 5061990 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.73 | 68.0 | 5.55e-01 | 100.0% | 59.6% |
| 4974491 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.73 | 67.0 | 5.40e-01 | 100.0% | 55.4% |
| 3932280 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.51 | 41.0 | 2.99e-01 | 87.5% | 61.0% |