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HQ225832.1__ADX42541.1__X__00021

Bact-Vir

HQ225832.1__ADX42541.1__X__00021

Identity

Accession:
HQ225832 ↗
Kingdom:
phage

Quality

70.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Tijeunavirus› Tetrasphaera_phage_TJE1

TaxID: 981335

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 60-117
PDB
D2 medium residues 118-145_174-283
PDB
Domain cluster: rep: MG209611.1__ATW59280.1__Cl131_gp012__00012__D104-225
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 29.0 3.77e-01 94.9% 92.1%
3kdrA02 3.40.140.120 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › 0.53 35.0 3.70e-01 74.6% 73.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3942110 4056.1.1.8 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_portal_3 0.80 56.0 5.86e-01 71.0% 82.4%
5039293 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.68 38.0 4.93e-01 71.0% 100.0%
3931419 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.52 26.0 3.24e-01 91.3% 76.5%
D3 medium residues 146-173_284-315_367-395_412-462
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8b6jF01 1.10.287.20 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain 0.63 31.0 4.47e-01 95.0% 100.0%
1sg2A00 3.30.910.20 Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain 0.57 46.0 4.61e-01 85.7% 83.0%
4n4gA01 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.52 30.0 3.32e-01 90.7% 68.5%
7zd5C01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.51 45.0 3.47e-01 97.1% 81.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3725145 1075.4.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.58 40.0 3.01e-01 71.4% 63.3%
4944284 1075.4.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.56 41.0 3.06e-01 75.0% 33.9%
3587916 1075.4.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.54 40.0 3.07e-01 76.4% 36.8%
4606660 1075.4.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.53 38.0 2.99e-01 75.0% 35.8%
4945254 1075.4.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.53 39.0 2.97e-01 75.7% 34.2%
D4 medium residues 463-525
PDB