←Back to structures
HQ225832.1__ADX42575.1__X__00055
Bact-VirHQ225832.1__ADX42575.1__X__00055
Identity
- Accession:
- HQ225832 ↗
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Taxonomy
TaxID: 981335
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-88
Domain cluster:
rep: S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00157__D37-87
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.71 | 60.0 | 5.31e-01 | 100.0% | 84.8% |
| 1l5jA02 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.70 | 48.0 | 3.19e-01 | 70.6% | 85.0% |
| 2k4jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 55.0 | 4.34e-01 | 88.2% | 45.7% |
| 3vsmA03 | 2.60.40.4340 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 47.0 | 3.91e-01 | 76.5% | 43.6% |
| 3aihB01 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.64 | 44.0 | 3.50e-01 | 70.6% | 59.8% |
| 1kgsA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 52.0 | 4.20e-01 | 90.2% | 86.7% |
| 3p54A02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.64 | 48.0 | 4.37e-01 | 84.3% | 69.0% |
| 3d5pA00 | 3.40.1580.10 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like | 0.64 | 52.0 | 4.02e-01 | 100.0% | 92.5% |
| 3pqhA01 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.64 | 46.0 | 4.41e-01 | 78.4% | 71.7% |
| 3uuwB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.63 | 48.0 | 3.32e-01 | 84.3% | 72.3% |
| 2m1bA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 50.0 | 3.81e-01 | 86.3% | 71.6% |
| 1ujrA01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.63 | 48.0 | 4.15e-01 | 84.3% | 59.0% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.62 | 52.0 | 4.02e-01 | 96.1% | 58.5% |
| 1dxkA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.62 | 51.0 | 3.43e-01 | 98.0% | 94.6% |
| 2arzA02 | 3.20.180.10 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like | 0.62 | 47.0 | 4.08e-01 | 90.2% | 87.5% |
| 2bszA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.61 | 51.0 | 3.65e-01 | 98.0% | 68.2% |
| 5dcmB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 45.0 | 3.66e-01 | 82.4% | 86.7% |
| 1d0qA00 | 3.90.580.10 | Alpha Beta › Alpha-Beta Complex › DNA Primase; Chain A › Zinc finger, CHC2-type domain | 0.60 | 51.0 | 4.17e-01 | 100.0% | 51.0% |
| 4h5iB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 51.0 | 3.12e-01 | 100.0% | 92.8% |
| 3kf3A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.58 | 39.0 | 2.76e-01 | 70.6% | 51.4% |
| 2atcB02 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.57 | 41.0 | 4.08e-01 | 78.4% | 100.0% |
| 3hlzB01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.56 | 49.0 | 3.59e-01 | 100.0% | 40.7% |
| 2jmbA00 | 2.40.128.290 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 | 0.56 | 46.0 | 4.08e-01 | 96.1% | 81.0% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.56 | 42.0 | 3.27e-01 | 84.3% | 63.3% |
| 8dc1A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 44.0 | 2.94e-01 | 94.1% | 23.3% |
| 2cn3A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 45.0 | 2.86e-01 | 98.0% | 51.4% |
| 3ni8A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 44.0 | 3.41e-01 | 100.0% | 69.3% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.54 | 39.0 | 3.16e-01 | 84.3% | 37.5% |
| 3o44A03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 39.0 | 3.08e-01 | 82.4% | 81.0% |
| 1w5rA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.53 | 44.0 | 3.16e-01 | 100.0% | 64.7% |
| 1iv8A05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 42.0 | 3.97e-01 | 100.0% | 74.2% |
| 2js3A01 | 1.10.287.780 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ITPase-like domains | 0.52 | 35.0 | 3.19e-01 | 72.5% | 50.0% |
| 4hz4A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 40.0 | 3.52e-01 | 90.2% | 83.3% |
| 1eq6A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.51 | 39.0 | 2.83e-01 | 92.2% | 83.6% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4428121 | 2487.1.1.3 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Aconitase_C | 0.76 | 52.0 | 3.38e-01 | 70.6% | 83.4% |
| 3237920 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.72 | 49.0 | 2.91e-01 | 70.6% | 30.7% |
| 3230776 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.72 | 50.0 | 2.95e-01 | 72.5% | 32.0% |
| 3502859 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.72 | 51.0 | 3.14e-01 | 74.5% | 32.0% |
| 3744814 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.71 | 59.0 | 5.03e-01 | 98.0% | 84.4% |
| 3206496 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.68 | 52.0 | 2.96e-01 | 84.3% | 22.0% |
| 3373382 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.67 | 58.0 | 3.43e-01 | 100.0% | 29.5% |
| 3308728 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.66 | 58.0 | 3.41e-01 | 100.0% | 28.8% |
| 3763426 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.65 | 54.0 | 3.69e-01 | 98.0% | 42.6% |
| 3365640 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.65 | 52.0 | 3.09e-01 | 90.2% | 44.6% |
| 4421368 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.64 | 55.0 | 3.79e-01 | 100.0% | 38.9% |
| 4517026 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.64 | 54.0 | 3.66e-01 | 100.0% | 35.1% |
| 2581407 | 241.14.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › SARS-unique domain-C › SARS-unique domain-C | 0.63 | 52.0 | 4.70e-01 | 100.0% | 75.6% |
| 4456367 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.62 | 51.0 | 3.85e-01 | 92.2% | 60.8% |
| 3846048 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.62 | 50.0 | 3.47e-01 | 98.0% | 41.0% |
| 3858984 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.62 | 51.0 | 3.56e-01 | 100.0% | 36.9% |
| 3624203 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.61 | 50.0 | 2.97e-01 | 94.1% | 37.4% |
| 3782747 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.61 | 51.0 | 4.56e-01 | 100.0% | 90.0% |
| 3175596 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.60 | 47.0 | 2.78e-01 | 88.2% | 99.8% |
| 3626626 | 2485.1.1.109 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF26957 | 0.59 | 47.0 | 3.47e-01 | 90.2% | 95.3% |
| 3416181 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 48.0 | 2.91e-01 | 94.1% | 46.5% |
| 3731547 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.59 | 48.0 | 3.05e-01 | 100.0% | 80.8% |
| 3246345 | 5.1.4.341 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd | 0.58 | 47.0 | 2.91e-01 | 90.2% | 98.0% |
| 3217609 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.58 | 38.0 | 4.04e-01 | 78.4% | 81.4% |
| 4299504 | 1013.1.1.1 ↗ | beta duplicates or obligate multimers › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › DUF3337 | 0.58 | 48.0 | 3.19e-01 | 92.2% | 33.0% |
| 3251307 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.58 | 46.0 | 2.88e-01 | 96.1% | 27.6% |
| 4512988 | 1013.1.1.0 ↗ | beta duplicates or obligate multimers › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain | 0.57 | 47.0 | 3.14e-01 | 92.2% | 32.2% |
| 3889957 | 1013.1.1.0 ↗ | beta duplicates or obligate multimers › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain | 0.57 | 47.0 | 3.06e-01 | 92.2% | 28.7% |
| 3399261 | 5.1.4.371 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Frtz | 0.57 | 48.0 | 2.86e-01 | 98.0% | 63.3% |
| 3726720 | 1013.1.1.1 ↗ | beta duplicates or obligate multimers › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › DUF3337 | 0.56 | 46.0 | 2.98e-01 | 92.2% | 28.7% |
| 3237443 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 45.0 | 2.69e-01 | 92.2% | 76.8% |
| 3607940 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 47.0 | 2.86e-01 | 98.0% | 96.3% |
| 4187379 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 43.0 | 3.36e-01 | 90.2% | 52.5% |
| 3391729 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 42.0 | 2.57e-01 | 98.0% | 21.1% |
| 3804151 | 5.1.4.348 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_1st | 0.54 | 43.0 | 2.79e-01 | 100.0% | 50.2% |
| 4030470 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 46.0 | 2.57e-01 | 100.0% | 55.9% |
| 3888377 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.53 | 44.0 | 3.12e-01 | 100.0% | 60.5% |
| 3740947 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.53 | 42.0 | 2.65e-01 | 100.0% | 38.7% |
| 3479921 | 11.2.1.39 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › dsrm_Ferlin | 0.53 | 47.0 | 3.80e-01 | 100.0% | 69.0% |
| 3933565 | 5.1.4.229 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N | 0.51 | 39.0 | 2.44e-01 | 94.1% | 20.0% |