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HQ225832.1__ADX42578.1__X__00058

Bact-Vir

HQ225832.1__ADX42578.1__X__00058

Identity

Accession:
HQ225832 ↗
Kingdom:
phage

Quality

84.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Tijeunavirus› Tetrasphaera_phage_TJE1

TaxID: 981335

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-71
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xzmV01 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.79 57.0 5.28e-01 89.6% 60.7%
3eupB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.77 56.0 3.62e-01 100.0% 18.5%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.77 54.0 4.88e-01 75.0% 55.4%
1xdxA01 3.30.1140.40 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 0.75 60.0 4.76e-01 100.0% 43.0%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.75 57.0 4.81e-01 83.3% 50.6%
1f02T00 4.10.820.10 Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain 0.74 63.0 5.75e-01 97.9% 97.0%
4m70B00 1.10.246.200 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain 0.71 62.0 5.06e-01 100.0% 52.7%
2d2sA02 1.20.58.1220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, C-terminal helical domain 0.71 58.0 4.56e-01 91.7% 46.5%
2gxaE01 1.10.10.510 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain 0.71 58.0 5.09e-01 91.7% 69.9%
1jb0K00 1.20.860.20 Mainly Alpha › Up-down Bundle › Alpha-t-alpha › Photosystem I PsaK, reaction centre 0.71 57.0 5.85e-01 97.9% 100.0%
5k2xA00 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.69 61.0 3.54e-01 100.0% 83.3%
4nooB00 1.10.8.1160 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.69 62.0 4.91e-01 100.0% 70.5%
2bskB00 1.10.287.810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains 0.67 56.0 5.08e-01 93.8% 95.4%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.66 50.0 4.15e-01 83.3% 46.0%
1rv2D04 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.65 51.0 4.52e-01 85.4% 58.6%
4m0mA03 1.20.1270.430 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.65 53.0 4.48e-01 100.0% 54.4%
3keyA01 1.10.10.1080 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain 0.63 55.0 4.54e-01 100.0% 78.2%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 4.22e-01 93.8% 54.9%
4uelA02 1.20.58.860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 53.0 4.60e-01 93.8% 63.9%
5dcaA11 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 55.0 4.23e-01 100.0% 51.4%
1eteA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.61 47.0 3.51e-01 85.4% 81.3%
2hroA02 1.10.274.10 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain 0.61 55.0 3.99e-01 100.0% 95.3%
3nbxX03 1.20.58.1510 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 48.0 3.79e-01 89.6% 43.6%
3euwA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 46.0 2.97e-01 85.4% 75.1%
4m9aA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.57 44.0 3.34e-01 85.4% 45.4%
4iv6B01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.54 38.0 3.04e-01 79.2% 43.1%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3411151 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.82 74.0 6.30e-01 100.0% 64.0%
3926367 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.80 71.0 4.31e-01 100.0% 30.5%
3189719 5063.1.1.0 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK 0.78 67.0 6.40e-01 100.0% 83.6%
3265318 1145.1.1.0 ↗ few secondary structure elements › nigellin-1.1 › nigellin-1.1 › nigellin-1.1 0.78 68.0 6.85e-01 97.9% 95.9%
3269852 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.77 67.0 4.10e-01 100.0% 28.8%
4965021 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.76 54.0 5.15e-01 83.3% 65.5%
3188738 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.75 64.0 3.95e-01 100.0% 16.3%
4241107 101.1.2.90 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.75 64.0 4.11e-01 100.0% 20.4%
3761374 3826.1.1.36 ↗ alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Mito_carr 0.74 64.0 4.78e-01 100.0% 39.8%
2972075 3759.1.1.1 ↗ alpha arrays › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antiterm 0.73 63.0 5.61e-01 100.0% 81.7%
3608317 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.72 60.0 5.20e-01 100.0% 65.0%
1945939 6026.1.1.1 ↗ alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › cwf21 0.71 59.0 4.67e-01 100.0% 47.2%
3930750 142.1.1.36 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › C_tripleX 0.70 57.0 5.09e-01 100.0% 62.7%
3211598 864.1.1.1 ↗ a+b two layers › DLC › DLC › DLC › Dynein_light 0.70 53.0 4.37e-01 100.0% 43.4%
3438464 5063.1.1.0 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK 0.70 57.0 5.65e-01 97.9% 94.0%
3798489 164.1.1.0 ↗ alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II 0.69 57.0 4.41e-01 100.0% 40.9%
3685214 632.18.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 0.69 61.0 5.05e-01 100.0% 72.9%
4312324 605.1.1.306 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PF30649 0.68 52.0 4.44e-01 81.2% 70.7%
3748738 106.1.1.16 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Miga 0.68 58.0 3.75e-01 100.0% 20.4%
3959623 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.67 52.0 3.91e-01 93.8% 35.7%
3890294 4970.1.1.22 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › Focal_AT 0.67 54.0 4.92e-01 91.7% 66.2%
4053061 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.67 51.0 5.09e-01 81.2% 79.6%
4985912 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.66 58.0 3.60e-01 100.0% 28.0%
2822545 101.1.8.3 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Topoisom_I,Topo_C_assoc 0.66 54.0 5.14e-01 93.8% 77.2%
3309541 5063.1.1.17 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Gly-zipper_YMGG 0.66 58.0 5.45e-01 100.0% 81.7%
3208600 109.4.1.560 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mus7 0.65 50.0 3.08e-01 83.3% 14.7%
4557682 5063.1.1.21 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Transgly_assoc 0.65 53.0 4.75e-01 100.0% 65.3%
3798232 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.64 54.0 4.51e-01 100.0% 53.4%
3599060 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.64 49.0 3.33e-01 91.7% 21.5%
4998530 2498.1.1.10 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.63 56.0 3.48e-01 100.0% 43.4%
3265419 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.62 54.0 4.53e-01 95.8% 78.8%
3357142 610.3.1.0 ↗ alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.59 42.0 3.90e-01 79.2% 59.4%