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HQ268735.1__ADT64036.1__X__00029
Bact-VirHQ268735.1__ADT64036.1__X__00029
Identity
- Accession:
- HQ268735 ↗
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-63
Domain cluster:
rep: SRR1747046_scaffold_45_prodigal-single.1__X__X__00187__D20-74
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gg6A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.65 | 53.0 | 4.05e-01 | 91.7% | 60.4% |
| 4dywA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.65 | 49.0 | 3.88e-01 | 83.3% | 65.1% |
| 3eesA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.64 | 49.0 | 3.84e-01 | 83.3% | 62.6% |
| 3a6sA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.63 | 48.0 | 3.83e-01 | 83.3% | 64.0% |
| 3gwyB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.63 | 47.0 | 3.74e-01 | 83.3% | 63.2% |
| 2x9zA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.63 | 48.0 | 3.92e-01 | 83.3% | 75.2% |
| 4kyxA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.62 | 48.0 | 3.70e-01 | 83.3% | 61.2% |
| 3grnA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.61 | 45.0 | 3.58e-01 | 83.3% | 60.9% |
| 1tifA00 | 3.10.20.80 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Translation initiation factor 3 (IF-3), N-terminal domain | 0.61 | 47.0 | 4.50e-01 | 96.7% | 72.4% |
| 6u7tA03 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.60 | 46.0 | 3.71e-01 | 83.3% | 64.5% |
| 1se9A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 46.0 | 3.90e-01 | 83.3% | 83.2% |
| 1dmhA00 | 2.60.130.10 | Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase | 0.59 | 46.0 | 2.92e-01 | 85.0% | 51.5% |
| 3htrA00 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.58 | 47.0 | 4.06e-01 | 90.0% | 72.4% |
| 4iltC00 | 2.60.130.10 | Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase | 0.58 | 45.0 | 3.36e-01 | 85.0% | 77.4% |
| 3blzA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 45.0 | 3.76e-01 | 96.7% | 83.9% |
| 4b0eD00 | 3.10.20.410 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain | 0.56 | 45.0 | 3.87e-01 | 90.0% | 81.0% |
| 6scxA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.56 | 42.0 | 3.34e-01 | 83.3% | 60.0% |
| 2qdfA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.56 | 41.0 | 3.90e-01 | 83.3% | 93.5% |
| 2derA02 | 2.30.30.280 | Mainly Beta › Roll › SH3 type barrels. › Adenine nucleotide alpha hydrolases-like domains | 0.55 | 43.0 | 4.11e-01 | 86.7% | 87.0% |
| 6j09A03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 40.0 | 3.67e-01 | 81.7% | 98.8% |
| 3mn8B02 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.54 | 41.0 | 3.75e-01 | 83.3% | 95.2% |
| 2r4iA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 41.0 | 3.44e-01 | 90.0% | 88.6% |
| 6dx5A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.53 | 39.0 | 2.91e-01 | 81.7% | 78.7% |
| 4fchA01 | 2.60.40.3620 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 44.0 | 3.74e-01 | 98.3% | 89.9% |
| 3qc8B00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 40.0 | 3.71e-01 | 85.0% | 93.8% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 40.0 | 3.63e-01 | 83.3% | 92.7% |
| 5zliA01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.52 | 41.0 | 3.61e-01 | 98.3% | 87.7% |
| 1m94A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 38.0 | 3.68e-01 | 85.0% | 98.6% |
| 2pmzB05 | 3.90.1070.20 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.51 | 45.0 | 4.15e-01 | 100.0% | 90.0% |
| 2qy6A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 35.0 | 2.49e-01 | 76.7% | 85.5% |
| 6ioyC02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 40.0 | 2.77e-01 | 85.0% | 64.2% |
| 2yziB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 39.0 | 3.09e-01 | 86.7% | 70.4% |
| 1z2mA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 39.0 | 3.65e-01 | 86.7% | 93.5% |
| 2x8xX01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.50 | 38.0 | 3.55e-01 | 83.3% | 88.2% |
| 2l66A00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.50 | 31.0 | 3.25e-01 | 88.3% | 69.8% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4542419 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.70 | 58.0 | 4.55e-01 | 90.0% | 72.5% |
| 3665729 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.69 | 53.0 | 3.70e-01 | 81.7% | 56.8% |
| 3379619 | 328.12.1.0 ↗ | a+b two layers › IF3-like › IF3-like domain in Nudix hydrolase › IF3-like domain in Nudix hydrolase | 0.69 | 53.0 | 3.42e-01 | 83.3% | 31.1% |
| 3517966 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.68 | 51.0 | 4.09e-01 | 83.3% | 70.4% |
| 4344731 | 221.2.1.2 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › mIF3 | 0.67 | 56.0 | 5.05e-01 | 100.0% | 73.3% |
| 3789481 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.67 | 49.0 | 3.59e-01 | 80.0% | 72.1% |
| 4011733 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.66 | 53.0 | 3.90e-01 | 86.7% | 56.8% |
| 3191529 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.66 | 51.0 | 3.72e-01 | 83.3% | 53.1% |
| 3935196 | 221.1.1.163 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › GRHL1_C | 0.66 | 57.0 | 4.96e-01 | 100.0% | 92.6% |
| 3879611 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.66 | 52.0 | 3.89e-01 | 90.0% | 43.1% |
| 3275069 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.65 | 50.0 | 3.68e-01 | 83.3% | 51.9% |
| 3509290 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.65 | 50.0 | 4.11e-01 | 83.3% | 76.4% |
| 5039326 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.65 | 51.0 | 3.85e-01 | 83.3% | 60.0% |
| 3476727 | 221.1.1.51 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_C2 | 0.65 | 51.0 | 4.34e-01 | 86.7% | 96.0% |
| 5027673 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.64 | 49.0 | 3.69e-01 | 85.0% | 54.8% |
| 5058061 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.64 | 48.0 | 3.69e-01 | 83.3% | 63.4% |
| 4941147 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.64 | 48.0 | 3.73e-01 | 83.3% | 60.0% |
| 4017731 | 221.2.1.0 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N | 0.63 | 53.0 | 4.88e-01 | 96.7% | 77.5% |
| 3620519 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.63 | 50.0 | 4.49e-01 | 86.7% | 91.8% |
| 3682777 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.63 | 48.0 | 3.56e-01 | 85.0% | 53.3% |
| 3668077 | 221.2.1.1 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N | 0.63 | 50.0 | 4.74e-01 | 100.0% | 73.3% |
| 4108510 | 221.2.1.1 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N | 0.63 | 50.0 | 4.65e-01 | 96.7% | 70.0% |
| 2324001 | 101.1.2.453 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_DnaB | 0.63 | 50.0 | 3.86e-01 | 91.7% | 70.7% |
| 3265492 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.62 | 48.0 | 4.68e-01 | 83.3% | 92.3% |
| 3532154 | 221.1.1.163 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › GRHL1_C | 0.62 | 51.0 | 4.77e-01 | 95.0% | 97.3% |
| 4168875 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.58 | 51.0 | 4.39e-01 | 98.3% | 91.6% |
| 3183753 | 59.1.1.9 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › EAF | 0.58 | 36.0 | 2.93e-01 | 90.0% | 30.4% |
| 4528705 | 2008.1.1.182 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF26351 | 0.58 | 41.0 | 3.03e-01 | 75.0% | 52.5% |
| 3193544 | 221.2.1.1 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N | 0.58 | 44.0 | 4.22e-01 | 96.7% | 72.6% |
| 3977403 | 221.4.1.9 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 | 0.57 | 42.0 | 3.46e-01 | 83.3% | 60.8% |
| 5066674 | 3111.1.1.0 ↗ | beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain | 0.57 | 42.0 | 3.44e-01 | 80.0% | 71.3% |
| 4856785 | 221.2.1.1 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N | 0.57 | 44.0 | 4.12e-01 | 96.7% | 67.5% |
| 4139867 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.57 | 48.0 | 4.21e-01 | 98.3% | 95.8% |
| 4197235 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.57 | 49.0 | 4.26e-01 | 98.3% | 95.8% |
| 3824883 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.56 | 42.0 | 3.86e-01 | 83.3% | 91.8% |
| 3963238 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.56 | 43.0 | 3.72e-01 | 83.3% | 89.5% |
| 3502554 | 221.2.1.1 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N | 0.55 | 45.0 | 4.44e-01 | 98.3% | 92.3% |
| 4388828 | 2003.1.5.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 | 0.55 | 37.0 | 2.58e-01 | 73.3% | 78.0% |
| 4294175 | 4.6.1.5 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › tRNA_Me_trans_M | 0.54 | 45.0 | 3.93e-01 | 91.7% | 88.9% |
| 3305428 | 221.3.1.5 ↗ | a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains › Zn_SUZ12 | 0.54 | 47.0 | 4.11e-01 | 100.0% | 88.4% |
| 4264098 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 41.0 | 3.33e-01 | 85.0% | 59.2% |
| 3794595 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.54 | 42.0 | 2.74e-01 | 86.7% | 19.3% |
| 3574767 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.53 | 42.0 | 2.91e-01 | 85.0% | 26.2% |
| 4407101 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.53 | 39.0 | 3.76e-01 | 83.3% | 94.7% |
| 4949222 | 225.2.1.1 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Uncharacterized protein DIP2311 middle domain › Uncharacterized protein DIP2311 middle domain › HATPase_c_4 | 0.53 | 41.0 | 2.65e-01 | 83.3% | 29.3% |
| 3627917 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.53 | 44.0 | 3.15e-01 | 91.7% | 31.7% |
| 3424421 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 43.0 | 3.78e-01 | 93.3% | 68.4% |
| 3739029 | 7529.1.1.3 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N | 0.52 | 40.0 | 2.85e-01 | 83.3% | 28.9% |
| 4027954 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.52 | 40.0 | 3.66e-01 | 91.7% | 90.0% |
| 3907144 | 221.1.1.59 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_4 | 0.51 | 40.0 | 3.15e-01 | 86.7% | 65.2% |
| 5037577 | 4961.1.1.1 ↗ | a+b complex topology › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › RNA_pol_Rpb2_4 | 0.51 | 44.0 | 3.85e-01 | 100.0% | 83.2% |
| 5078399 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.50 | 39.0 | 3.05e-01 | 88.3% | 72.1% |