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HQ268735.1__ADT64039.1__X__00032

Bact-Vir

HQ268735.1__ADT64039.1__X__00032

Identity

Accession:
HQ268735 ↗
Kingdom:
phage

Quality

87.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_Dp-1

TaxID: 59241

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-122
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 28.0 3.86e-01 73.7% 96.5%
1jcfA03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.57 36.0 4.32e-01 76.3% 98.7%
1j3mA00 3.30.310.70 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TT1751-like domain 0.54 34.0 3.33e-01 84.7% 57.5%
1o17D02 3.40.1030.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.52 39.0 3.15e-01 78.0% 95.0%
1r9fA01 3.30.390.180 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 0.52 31.0 3.22e-01 90.7% 61.5%
1khdD02 3.40.1030.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.52 39.0 3.16e-01 78.8% 95.5%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4101502 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.65 31.0 4.43e-01 73.7% 100.0%
3392130 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.62 35.0 4.53e-01 79.7% 100.0%
4177200 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.62 30.0 4.26e-01 76.3% 100.0%
5032977 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 32.0 3.78e-01 75.4% 83.7%
4973193 802.1.1.1 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.52 27.0 3.16e-01 79.7% 69.4%
4931303 802.1.1.1 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.51 27.0 3.12e-01 79.7% 69.4%
5075212 802.1.1.1 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.51 27.0 3.05e-01 79.7% 65.6%
4057742 2.4.1.11 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 0.51 27.0 3.53e-01 70.3% 93.8%
3289254 220.1.1.82 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.50 29.0 3.14e-01 72.9% 66.3%