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HQ268735.1__ADT64056.1__X__00049
Bact-VirHQ268735.1__ADT64056.1__X__00049
Identity
- Accession:
- HQ268735 ↗
- Kingdom:
- phage
Quality
91.9
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-182
Domain cluster:
rep: SRR1747021_scaffold_144_prodigal-single.1__X__X__00059__D46-135_173-256
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.71 | 54.0 | 5.89e-01 | 98.9% | 93.3% |
| 3he1A00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.70 | 52.0 | 5.75e-01 | 99.4% | 92.5% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.69 | 52.0 | 5.54e-01 | 98.3% | 86.9% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.68 | 38.0 | 5.03e-01 | 86.5% | 100.0% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.68 | 54.0 | 5.70e-01 | 99.4% | 91.4% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.67 | 52.0 | 5.55e-01 | 99.4% | 91.7% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 27.0 | 3.58e-01 | 82.0% | 80.0% |
| 2yjlA00 | 2.60.40.2990 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 31.0 | 3.84e-01 | 100.0% | 85.2% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 27.0 | 3.55e-01 | 81.5% | 83.3% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.56 | 29.0 | 3.29e-01 | 92.1% | 63.0% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.56 | 36.0 | 4.20e-01 | 88.2% | 92.0% |
| 3i4hX02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 26.0 | 3.36e-01 | 78.7% | 76.9% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3943316 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.83 | 69.0 | 7.25e-01 | 99.4% | 95.6% |
| 4954551 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.82 | 57.0 | 6.55e-01 | 99.4% | 93.3% |
| 5078836 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 50.0 | 6.38e-01 | 97.8% | 100.0% |
| 3964955 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.79 | 68.0 | 7.17e-01 | 97.8% | 100.0% |
| 3976188 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.78 | 58.0 | 6.07e-01 | 100.0% | 82.4% |
| 2471641 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.78 | 58.0 | 6.28e-01 | 99.4% | 91.3% |
| 5003885 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.77 | 58.0 | 6.35e-01 | 98.9% | 93.8% |
| 5079559 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 50.0 | 6.10e-01 | 92.7% | 100.0% |
| 4954552 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.75 | 64.0 | 6.74e-01 | 98.3% | 98.8% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.74 | 58.0 | 6.05e-01 | 100.0% | 87.2% |
| 2832216 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.74 | 60.0 | 6.40e-01 | 99.4% | 96.7% |
| 2595159 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.74 | 57.0 | 5.92e-01 | 100.0% | 85.5% |
| 4988100 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 51.0 | 5.96e-01 | 96.6% | 100.0% |
| 1563850 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.69 | 52.0 | 5.54e-01 | 98.3% | 86.9% |
| 4929752 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.69 | 54.0 | 5.76e-01 | 98.9% | 92.9% |
| 3977123 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.69 | 55.0 | 5.76e-01 | 99.4% | 91.9% |
| 3969384 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.68 | 55.0 | 5.78e-01 | 99.4% | 92.5% |
| 184986 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.67 | 46.0 | 5.39e-01 | 94.9% | 99.2% |
| 80 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.67 | 53.0 | 5.60e-01 | 99.4% | 91.9% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 37.0 | 4.39e-01 | 88.8% | 77.6% |
| 3265120 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.64 | 52.0 | 5.25e-01 | 98.9% | 85.1% |
| 3264744 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.64 | 51.0 | 5.20e-01 | 98.9% | 85.1% |
| 3232486 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.61 | 31.0 | 3.96e-01 | 97.2% | 81.0% |
| 3944430 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 35.0 | 4.51e-01 | 87.6% | 97.1% |
| 3836146 | 1.1.9.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA | 0.57 | 42.0 | 4.59e-01 | 95.5% | 91.7% |
| 3263951 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 23.0 | 3.16e-01 | 79.8% | 76.5% |
| 3749000 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.51 | 28.0 | 3.44e-01 | 80.9% | 81.7% |
| 4513450 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.50 | 23.0 | 2.93e-01 | 98.9% | 71.4% |
D2
high
residues 189-258
Domain cluster:
rep: IMGVR_UViG_3300029589_000301-3300029589-Ga0245106_10093019__D698-763
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09479.17 best | Flg_new | 49.5 | 5.40e-13 | 95.7% | 96.9% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2y5pA00 | 2.60.40.4270 | Mainly Beta › Sandwich › Immunoglobulin-like › Listeria-Bacteroides repeat domain | 0.87 | 78.0 | 7.80e-01 | 100.0% | 93.1% |
| 6bbtA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.68 | 59.0 | 5.02e-01 | 100.0% | 97.5% |
| 3u7zA00 | 2.170.130.30 | Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › | 0.68 | 58.0 | 5.31e-01 | 100.0% | 95.9% |
| 3ah7A00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.67 | 60.0 | 5.16e-01 | 100.0% | 93.6% |
| 5xfaA03 | 3.10.20.600 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.66 | 58.0 | 5.55e-01 | 100.0% | 97.5% |
| 2jx5A00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.64 | 51.0 | 5.13e-01 | 98.6% | 88.4% |
| 3p1mA00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.64 | 56.0 | 4.66e-01 | 100.0% | 82.5% |
| 1a70A00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.64 | 56.0 | 5.08e-01 | 100.0% | 95.9% |
| 1krhA01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.64 | 56.0 | 4.98e-01 | 100.0% | 92.2% |
| 1v5oA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.63 | 55.0 | 4.92e-01 | 100.0% | 75.5% |
| 8dfkB01 | 3.10.560.10 | Alpha Beta › Roll › Outer membrane lipoprotein wza fold like › Outer membrane lipoprotein wza domain like | 0.63 | 47.0 | 5.00e-01 | 97.1% | 100.0% |
| 2bpsA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 52.0 | 5.04e-01 | 98.6% | 96.3% |
| 2kvzA00 | 3.10.20.320 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Putative peptidoglycan bound protein (lpxtg motif) | 0.61 | 49.0 | 4.68e-01 | 100.0% | 75.3% |
| 6jl3A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 54.0 | 5.30e-01 | 100.0% | 97.3% |
| 1zud400 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.61 | 47.0 | 4.88e-01 | 98.6% | 92.4% |
| 2dzjA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 53.0 | 4.96e-01 | 100.0% | 88.6% |
| 3jyuA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 52.0 | 4.84e-01 | 100.0% | 98.9% |
| 1xauA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 46.0 | 4.14e-01 | 85.7% | 80.8% |
| 1wxvA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 50.0 | 4.91e-01 | 98.6% | 100.0% |
| 2uwqA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 50.0 | 4.74e-01 | 100.0% | 93.0% |
| 5tfmA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.58 | 45.0 | 4.04e-01 | 85.7% | 81.2% |
| 1y56A01 | 3.10.20.440 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › 2Fe-2S iron-sulphur cluster binding domain, sarcosine oxidase, alpha subunit, N-terminal domain | 0.57 | 49.0 | 4.51e-01 | 100.0% | 79.8% |
| 2gbmA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 49.0 | 4.73e-01 | 100.0% | 97.5% |
| 2mqjA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 48.0 | 4.73e-01 | 100.0% | 94.8% |
| 4mt5A02 | 2.60.40.4300 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 47.0 | 4.05e-01 | 100.0% | 83.0% |
| 3r4rA02 | 2.60.40.2590 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 44.0 | 3.74e-01 | 100.0% | 88.0% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4291271 | 221.1.1.38 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Flg_new | 0.90 | 82.0 | 8.06e-01 | 100.0% | 90.7% |
| 4249879 | 221.1.1.38 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Flg_new | 0.89 | 81.0 | 8.11e-01 | 100.0% | 95.7% |
| 4554776 | 221.1.1.38 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Flg_new | 0.84 | 77.0 | 7.20e-01 | 100.0% | 94.1% |
| 3988635 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.74 | 65.0 | 6.50e-01 | 100.0% | 95.7% |
| 3882399 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.68 | 58.0 | 5.19e-01 | 100.0% | 67.0% |
| 5059685 | 221.1.4.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like › SLBB | 0.66 | 58.0 | 5.36e-01 | 98.6% | 76.7% |
| 5002005 | 221.1.4.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like | 0.66 | 56.0 | 5.63e-01 | 97.1% | 97.1% |
| 4930762 | 3114.1.1.6 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › Flg_new_2 | 0.66 | 57.0 | 5.75e-01 | 100.0% | 98.6% |
| 5061603 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 55.0 | 4.58e-01 | 100.0% | 88.1% |
| 4956486 | 3114.1.1.0 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain | 0.64 | 56.0 | 5.51e-01 | 100.0% | 100.0% |
| 4599839 | 221.1.4.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like | 0.64 | 56.0 | 5.55e-01 | 100.0% | 94.7% |
| 3997558 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 57.0 | 5.46e-01 | 100.0% | 91.3% |
| 4490982 | 221.1.4.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like › NQRA_SLBB | 0.64 | 54.0 | 4.76e-01 | 100.0% | 62.7% |
| 3165151 | 221.1.4.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like › SLBB | 0.63 | 54.0 | 5.20e-01 | 98.6% | 87.5% |
| 4828123 | 221.1.4.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like › NQRA_SLBB | 0.62 | 51.0 | 5.21e-01 | 97.1% | 97.1% |
| 3776212 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.62 | 53.0 | 5.23e-01 | 100.0% | 96.0% |
| 4064199 | 221.1.4.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like › NQRA_SLBB | 0.61 | 52.0 | 5.10e-01 | 100.0% | 96.0% |
| 3272771 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 51.0 | 4.90e-01 | 100.0% | 92.9% |
| 3587079 | 3114.1.1.1 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › MucBP | 0.59 | 48.0 | 4.94e-01 | 97.1% | 100.0% |
| 5052484 | 221.1.1.48 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Fer2_4 | 0.59 | 52.0 | 4.42e-01 | 100.0% | 91.3% |
| 4962840 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.58 | 49.0 | 4.30e-01 | 100.0% | 97.4% |
| 4002019 | 221.1.1.48 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Fer2_4 | 0.58 | 51.0 | 4.49e-01 | 100.0% | 88.6% |
| 3965820 | 221.1.1.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Fer2 | 0.57 | 50.0 | 4.71e-01 | 97.1% | 95.3% |
| 4942985 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 48.0 | 4.18e-01 | 100.0% | 88.3% |
| 5053444 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.57 | 43.0 | 4.57e-01 | 84.3% | 96.7% |
| 1498519 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.56 | 42.0 | 4.17e-01 | 84.3% | 74.0% |
| 3555963 | 221.1.1.80 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › KHA | 0.54 | 46.0 | 4.56e-01 | 100.0% | 94.7% |
| 3265335 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 45.0 | 4.15e-01 | 100.0% | 88.4% |