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HQ316580.1__AGG58051.1__VPAG_00015__00015
Bact-VirHQ316580.1__AGG58051.1__VPAG_00015__00015
Identity
- Accession:
- HQ316580 ↗
- Kingdom:
- phage
Quality
78.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-61_165-179
D2
medium
residues 62-164
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jykA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 37.0 | 4.61e-01 | 83.5% | 100.0% |
| 6z4xA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 42.0 | 3.75e-01 | 100.0% | 47.1% |
| 1exkA00 | 2.10.230.10 | Mainly Beta › Ribbon › Chaperone, DNAj Protein; Chain A › Heat shock protein DnaJ, cysteine-rich domain | 0.61 | 41.0 | 4.59e-01 | 73.8% | 88.6% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 42.0 | 4.28e-01 | 100.0% | 71.8% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 41.0 | 4.27e-01 | 100.0% | 76.6% |
| 1g3nC01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 38.0 | 3.70e-01 | 95.1% | 57.5% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 43.0 | 4.32e-01 | 100.0% | 76.4% |
| 4fgoA00 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.58 | 43.0 | 3.56e-01 | 78.6% | 56.4% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 31.0 | 3.95e-01 | 79.6% | 94.7% |
| 4xcgA02 | 3.30.260.10 | Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain | 0.57 | 49.0 | 4.80e-01 | 100.0% | 85.8% |
| 3nufB00 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.57 | 38.0 | 3.73e-01 | 100.0% | 63.4% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 26.0 | 3.47e-01 | 91.3% | 83.3% |
| 3s4lA00 | 1.10.3210.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.55 | 49.0 | 3.97e-01 | 100.0% | 88.8% |
| 4dtdA02 | 1.10.3680.20 | Mainly Alpha › Orthogonal Bundle › TerB-like › Actin cross-linking domain | 0.54 | 49.0 | 4.47e-01 | 100.0% | 79.6% |
| 3gmiA01 | 1.20.58.620 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 29.0 | 2.71e-01 | 95.1% | 38.0% |
| 1k87A02 | 1.10.2060.10 | Mainly Alpha › Orthogonal Bundle › PutA proline dehydrogenase (PRODH), domain 2 › PutA proline dehydrogenase (PRODH), domain 2 | 0.52 | 45.0 | 4.44e-01 | 96.1% | 92.7% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3598905 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.72 | 46.0 | 5.42e-01 | 73.8% | 94.3% |
| 3611413 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.69 | 44.0 | 5.15e-01 | 73.8% | 92.9% |
| 4885912 | 67.1.1.6 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG | 0.69 | 40.0 | 5.13e-01 | 85.4% | 100.0% |
| 3253984 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.66 | 34.0 | 3.94e-01 | 76.7% | 70.0% |
| 4208701 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.66 | 43.0 | 4.78e-01 | 77.7% | 85.0% |
| 4944631 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.63 | 40.0 | 3.91e-01 | 94.2% | 56.5% |
| 3729348 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.60 | 42.0 | 3.63e-01 | 100.0% | 45.3% |
| 5012802 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 45.0 | 4.73e-01 | 93.2% | 88.4% |
| 3482694 | 524.1.1.0 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p | 0.58 | 38.0 | 3.27e-01 | 71.8% | 41.8% |
| 3170201 | 2498.5.1.0 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like | 0.57 | 51.0 | 4.65e-01 | 100.0% | 76.4% |
| 5077293 | 101.1.2.210 ↗ | alpha arrays › HTH › HTH › winged helix domain › CggR_N | 0.57 | 44.0 | 4.44e-01 | 98.1% | 81.0% |
| 4351918 | 67.1.1.4 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG, DnaJ_C | 0.56 | 46.0 | 3.92e-01 | 88.3% | 74.7% |
| 3838077 | 3962.1.1.0 ↗ | alpha arrays › N-terminal helical domain in restriction-modification system methylation subunit-like › N-terminal helical domain in restriction-modification system methylation subunit › N-terminal helical domain in restriction-modification system methylation subunit | 0.56 | 51.0 | 4.32e-01 | 99.0% | 73.9% |
| 4417372 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.55 | 48.0 | 3.86e-01 | 100.0% | 88.4% |
| 4033888 | 101.1.1.489 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF722 | 0.55 | 31.0 | 2.94e-01 | 93.2% | 43.1% |
| 3393875 | 101.1.1.427 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › NT_N | 0.54 | 42.0 | 4.41e-01 | 100.0% | 92.6% |
| 4983317 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.53 | 40.0 | 3.90e-01 | 78.6% | 95.5% |
| 3312536 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.53 | 41.0 | 3.57e-01 | 83.5% | 65.6% |
| 3612866 | 1189.1.1.2 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG_B | 0.52 | 39.0 | 2.72e-01 | 79.6% | 86.3% |
| 3386948 | 101.1.2.152 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_47 | 0.52 | 32.0 | 3.70e-01 | 95.1% | 91.4% |
| 4984370 | 3646.1.1.1 ↗ | alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ | 0.52 | 39.0 | 2.95e-01 | 80.6% | 81.9% |
| 3734500 | 261.1.1.0 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.51 | 40.0 | 2.62e-01 | 88.3% | 61.6% |
| 4044417 | 1037.1.1.1 ↗ | alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT | 0.51 | 45.0 | 3.32e-01 | 100.0% | 41.8% |
| 3831347 | 188.1.1.5 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Tcp11 | 0.51 | 45.0 | 3.78e-01 | 100.0% | 68.9% |
| 3260583 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.50 | 44.0 | 3.75e-01 | 100.0% | 67.4% |