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HQ316580.1__AGG58064.1__VPAG_00028__00028
Bact-VirHQ316580.1__AGG58064.1__VPAG_00028__00028
Identity
- Accession:
- HQ316580 ↗
- Kingdom:
- phage
Quality
90.5
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-89
Domain cluster:
rep: KT070867.1__AKQ08371.1__PBC2_056__00056__D17-77
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 37.0 | 3.99e-01 | 91.3% | 57.6% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.62 | 38.0 | 3.97e-01 | 100.0% | 66.7% |
| 1zbdB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 40.0 | 3.34e-01 | 85.5% | 39.8% |
| 2lojA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.58 | 27.0 | 3.33e-01 | 81.2% | 69.2% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 32.0 | 3.01e-01 | 100.0% | 42.4% |
| 1v5uA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 32.0 | 2.78e-01 | 88.4% | 33.3% |
| 1ujcA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.53 | 39.0 | 3.11e-01 | 82.6% | 95.5% |
| 1r8oB01 | 2.30.30.480 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 30.0 | 3.15e-01 | 87.0% | 59.1% |
| 1t9hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 39.0 | 3.92e-01 | 85.5% | 91.8% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3804854 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.75 | 49.0 | 4.14e-01 | 92.8% | 40.9% |
| 5034882 | 4203.1.1.0 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like | 0.71 | 45.0 | 5.42e-01 | 72.5% | 100.0% |
| 3271441 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.71 | 50.0 | 5.53e-01 | 95.7% | 94.5% |
| 3803725 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.69 | 44.0 | 4.99e-01 | 88.4% | 90.0% |
| 3699520 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.67 | 42.0 | 4.80e-01 | 81.2% | 88.0% |
| 3803892 | 376.1.2.16 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT | 0.66 | 48.0 | 4.96e-01 | 88.4% | 81.5% |
| 3750265 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.65 | 45.0 | 4.82e-01 | 72.5% | 98.3% |
| 3237892 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.62 | 45.0 | 4.76e-01 | 85.5% | 86.7% |
| 5058270 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.61 | 34.0 | 3.66e-01 | 100.0% | 61.7% |
| 5029186 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.61 | 35.0 | 3.66e-01 | 100.0% | 60.0% |
| 4284778 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.60 | 34.0 | 3.36e-01 | 98.6% | 49.3% |
| 4981300 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.60 | 35.0 | 3.58e-01 | 98.6% | 58.5% |
| 4952854 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.58 | 33.0 | 3.37e-01 | 100.0% | 56.9% |
| 5040541 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.57 | 44.0 | 4.49e-01 | 97.1% | 89.2% |
| 3255870 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.56 | 44.0 | 3.85e-01 | 85.5% | 72.4% |
| 3451552 | 375.1.4.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain | 0.56 | 35.0 | 3.86e-01 | 76.8% | 79.6% |
| 4248149 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.56 | 43.0 | 4.10e-01 | 87.0% | 91.8% |
| 3839972 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.56 | 35.0 | 3.42e-01 | 100.0% | 57.3% |
| 8400 | 387.1.1.14 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › Toxin_16 | 0.52 | 29.0 | 3.62e-01 | 72.5% | 100.0% |
| None | — | 0.52 | 41.0 | 3.89e-01 | 87.0% | 85.9% | |
| 3471931 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.52 | 35.0 | 2.74e-01 | 91.3% | 32.0% |
| 140488 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.51 | 29.0 | 3.54e-01 | 73.9% | 95.1% |