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HQ316580.1__AGG58096.1__VPAG_00060__00060
Bact-VirHQ316580.1__AGG58096.1__VPAG_00060__00060
Identity
- Accession:
- HQ316580 ↗
- Kingdom:
- phage
Quality
80.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-62
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gp4B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.63 | 49.0 | 3.82e-01 | 100.0% | 38.5% |
| 4jqfA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 47.0 | 4.42e-01 | 91.4% | 65.8% |
| 1t98A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 52.0 | 4.64e-01 | 100.0% | 70.1% |
| 4o5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 43.0 | 4.11e-01 | 96.6% | 70.4% |
| 2mc3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 45.0 | 3.84e-01 | 100.0% | 58.3% |
| 2f3nA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.53 | 38.0 | 3.69e-01 | 77.6% | 92.3% |
| 1nv8B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.53 | 42.0 | 4.09e-01 | 98.3% | 81.7% |
| 3natA01 | 3.40.50.11250 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 | 0.52 | 41.0 | 3.23e-01 | 94.8% | 88.4% |
| 2wteA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 3.87e-01 | 100.0% | 73.6% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.57e-01 | 100.0% | 56.2% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4950846 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.77 | 60.0 | 6.39e-01 | 100.0% | 100.0% |
| 4191032 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.75 | 57.0 | 6.08e-01 | 100.0% | 98.0% |
| 3589130 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.73 | 56.0 | 5.77e-01 | 100.0% | 90.9% |
| 3589675 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.71 | 54.0 | 5.68e-01 | 98.3% | 98.0% |
| 3387406 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.67 | 54.0 | 4.46e-01 | 100.0% | 49.5% |
| 3512685 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.67 | 52.0 | 3.97e-01 | 86.2% | 38.1% |
| 3962178 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.64 | 55.0 | 4.44e-01 | 100.0% | 78.3% |
| 5053673 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.64 | 51.0 | 5.00e-01 | 100.0% | 83.1% |
| 5028046 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.64 | 49.0 | 5.05e-01 | 100.0% | 92.7% |
| 3710117 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 47.0 | 4.15e-01 | 100.0% | 56.7% |
| 3447913 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.61 | 51.0 | 4.28e-01 | 100.0% | 59.1% |
| 3441899 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.60 | 51.0 | 4.70e-01 | 100.0% | 76.2% |
| 3324960 | 101.1.2.183 ↗ | alpha arrays › HTH › HTH › winged helix domain › MUS81-like_WH | 0.59 | 49.0 | 4.15e-01 | 100.0% | 70.9% |
| 3801792 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.58 | 43.0 | 4.03e-01 | 100.0% | 64.0% |
| 4625443 | 5003.1.1.0 ↗ | extended segments › Mitochondrial cytochrome c oxidase subunit IV › Mitochondrial cytochrome c oxidase subunit IV › Mitochondrial cytochrome c oxidase subunit IV | 0.58 | 40.0 | 3.21e-01 | 74.1% | 34.4% |
| 4973462 | 101.1.2.297 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mrr_N | 0.57 | 47.0 | 3.93e-01 | 100.0% | 65.2% |
| 3652603 | 101.1.2.516 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25895 | 0.56 | 46.0 | 3.88e-01 | 100.0% | 51.8% |
| 4025308 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 46.0 | 4.15e-01 | 100.0% | 70.0% |
| 3788382 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.55 | 43.0 | 3.94e-01 | 98.3% | 63.7% |
| 3983569 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.55 | 41.0 | 3.11e-01 | 91.4% | 30.6% |
| 3804069 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.55 | 42.0 | 3.73e-01 | 100.0% | 54.7% |
| 3320650 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.55 | 43.0 | 3.76e-01 | 100.0% | 54.0% |
| 5022256 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 45.0 | 4.01e-01 | 100.0% | 71.1% |
| 5021801 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 44.0 | 4.13e-01 | 100.0% | 76.0% |
| 5047904 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.54 | 44.0 | 3.97e-01 | 100.0% | 74.4% |
| 4195219 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.53 | 44.0 | 3.85e-01 | 100.0% | 69.0% |
| 4012689 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 44.0 | 3.62e-01 | 100.0% | 75.0% |
| 3908381 | 101.1.2.507 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 | 0.53 | 44.0 | 3.89e-01 | 100.0% | 72.6% |
| 3281345 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 43.0 | 4.00e-01 | 100.0% | 70.0% |
| 4986778 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.53 | 45.0 | 3.68e-01 | 100.0% | 55.0% |
| 5032459 | 101.1.2.297 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mrr_N | 0.53 | 42.0 | 3.97e-01 | 100.0% | 73.8% |
| 4017591 | 101.1.2.520 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7779 | 0.52 | 42.0 | 3.89e-01 | 100.0% | 68.8% |
| 4509411 | 5003.1.1.0 ↗ | extended segments › Mitochondrial cytochrome c oxidase subunit IV › Mitochondrial cytochrome c oxidase subunit IV › Mitochondrial cytochrome c oxidase subunit IV | 0.52 | 35.0 | 2.96e-01 | 75.9% | 36.5% |
| 4876122 | 2484.1.1.87 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MreB-like_C | 0.52 | 40.0 | 3.06e-01 | 91.4% | 75.8% |
| 4586962 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.51 | 41.0 | 3.45e-01 | 100.0% | 59.2% |
| 3178978 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.50 | 40.0 | 3.32e-01 | 100.0% | 63.8% |
| 3626211 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 41.0 | 3.67e-01 | 100.0% | 77.9% |