←Back to structures

HQ316582.1__AGG58170.1__VPDG_00008__00008

Bact-Vir

HQ316582.1__AGG58170.1__VPDG_00008__00008

Identity

Accession:
HQ316582 ↗
Kingdom:
phage

Quality

88.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_henriette_12B8

TaxID: 573174

Cluster

View cluster (10 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-106
PDB
Domain cluster: rep: OP056089.1__UYD72102.1__X__00002__D5-102
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 39.3 5.30e-10 43.8% 93.5%
D2 high residues 117-162
PDB
Domain cluster: rep: OP172807.1__WAX16177.1__EH802P2_00072__00071__D76-121
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6zepA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.53 41.0 2.56e-01 93.5% 83.5%
5lqdD01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 39.0 2.59e-01 93.5% 55.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4414927 101.1.14.3 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.84 75.0 6.53e-01 100.0% 71.0%
4519945 101.1.14.4 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › PF31232 0.84 73.0 7.00e-01 100.0% 98.1%
3171408 101.1.14.3 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.82 70.0 6.90e-01 97.8% 96.0%
3058113 101.1.14.0 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases 0.81 70.0 6.77e-01 100.0% 86.5%
3587703 101.1.14.0 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases 0.79 68.0 6.70e-01 100.0% 94.0%